Cattle QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2021-05-11
Updated: 2024-04-23

Publication # 33896633 Details

Authors:	Butty AM, Chud TCS, Cardoso DF, Lopes LSF, Miglior F, Schenkel FS, Cánovas A, Häfliger IM, Drögemüller C, Stothard P, Malchiodi F, Baes CF (Contact: cbaes@uoguelph.ca)
Affiliation:	Department of Animal Biosciences, Centre for Genetic Improvement of Livestock, University of Guelph, Guelph, Ontario N1G 2W1, Canada; Vetsuisse Faculty, Institute of Genetics, University of Bern, Bern 3012, Switzerland
Title:	Genome-wide association study between copy number variants and hoof health traits in Holstein dairy cattle
Journal:	Journal Of Dairy Science, 104(7):8050-8061 (2021)	DOI: S0022-0302(21)00545-2
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Digital dermatitis reported for chromosome(s): Chr.20: QTL:221028. Chr.21: QTL:221029. Chr.29: QTL:221030. QTL for Heel horn erosion reported for chromosome(s): Chr.15: QTL:221031. Chr.16: QTL:221032. Chr.18: QTL:221033. Chr.26: QTL:221034. Chr.27: QTL:221035. Chr.29: QTL:221036. QTL for Interdigital hyperplasia reported for chromosome(s): Chr.8: QTL:221037. Chr.9: QTL:221038. Chr.23: QTL:221039. QTL for Sole hemorrhage reported for chromosome(s): Chr.10: QTL:221040. Chr.20: QTL:221041. Chr.27: QTL:221042. QTL for Sole ulcer reported for chromosome(s): Chr.2: QTL:221043, QTL:221044. Chr.12: QTL:221045. Chr.29: QTL:221046. QTL for White line disease reported for chromosome(s): Chr.4: QTL:221047. Chr.5: QTL:221048. Chr.7: QTL:221049. Chr.10: QTL:221050. Chr.23: QTL:312025. QTL for Interdigital dermatitis reported for chromosome(s): Chr.9: QTL:312023. QTL for Toe ulcer reported for chromosome(s): Chr.1: QTL:312024. QTL/association Reported by chromosomes: Chr.1 (1), Chr.2 (2), Chr.4 (1), Chr.5 (1), Chr.7 (1), Chr.8 (1), Chr.9 (2), Chr.10 (2), Chr.12 (1), Chr.15 (1), Chr.16 (1), Chr.18 (1), Chr.20 (2), Chr.21 (1), Chr.23 (2), Chr.26 (1), Chr.27 (2), Chr.29 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Butty AM, Chud TCS, Cardoso DF, Lopes LSF, Miglior F, Schenkel FS, Cánovas A, Häfliger IM, Drögemüller C, Stothard P, Malchiodi F, Baes CF (2021). Genome-wide association study between copy number variants and hoof health traits in Holstein dairy cattle. Journal of dairy science, 104(7):8050-8061; Curated into QTLdb on 2021-05-11. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=KiOb6J0KoM

Butty AM, Chud TCS, Cardoso DF, Lopes LSF, Miglior F, Schenkel FS, Cánovas A, Häfliger IM, Drögemüller C, Stothard P, Malchiodi F, Baes CF (2021). Genome-wide association study between copy number variants and hoof health traits in Holstein dairy cattle. Journal of dairy science, 104(7):8050-8061; DOI: https://dx.doi.org/S0022-0302(21)00545-2

Publication # 33896633 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: