• Click on each trait to browse further along the related trait ontology tree
• Click on each chromosome number to find the detailed QTL information on that chromosome

Number of QTL/association reported by traits:

• QTL for M. paratuberculosis susceptibility reported for chromosome(s):

  Chr.1: Asso:223083. Chr.8: Asso:223085. Chr.13: Asso:223084.

QTL/association Reported by chromosomes:

Chr.1 (1), Chr.8 (1), Chr.13 (1).

Number of gene-based eQTL/associations:

• eQTL for aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)-like (LOC538060):
  Chr.1: eQTL:223019;
• eQTL for MDS1 and EVI1 complex locus (MECOM):
  Chr.1: eQTL:222892;
• eQTL for proteasome assembly chaperone 1 (PSMG1):
  Chr.1: eQTL:222945;
• eQTL for thrombospondin type laminin G domain and EAR repeats (TSPEAR):
  Chr.1: eQTL:222980;
• eQTL for glutathione peroxidase 5 (GPX5):
  Chr.1: eQTL:222929;
• eQTL for karyopherin subunit alpha 6 (KPNA6):
  Chr.1: eQTL:222876;
• eQTL for phosphofructokinase, liver type (PFKL):
  Chr.1: eQTL:222922;
• eQTL for autoimmune regulator (AIRE):
  Chr.1: eQTL:223065;
• eQTL for WD repeat domain 49 (WDR49):
  Chr.1: eQTL:223005;
• eQTL for S100 calcium binding protein B (S100B):
  Chr.1: eQTL:222888;
• eQTL for peptidyl arginine deiminase 1 (PADI1):
  Chr.2: eQTL:223039;
• eQTL for spermatogenesis associated 21 (SPATA21):
  Chr.2: eQTL:222940;
• eQTL for taste receptor, type 1, member 2 (TAS1R2):
  Chr.2: eQTL:222956;
• eQTL for chimerin 1 (CHN1):
  Chr.2: eQTL:222906;
• eQTL for small Cajal body-specific RNA 1 (LOC112443661):
  Chr.2: eQTL:223029;
• eQTL for desmin (DES):
  Chr.2: eQTL:222891;
• eQTL for transcription elongation factor A3 (TCEA3):
  Chr.2: eQTL:223012;
• eQTL for atypical chemokine receptor 3 (ACKR3):
  Chr.3: eQTL:222976;
• eQTL for CD5 molecule like (CD5L):
  Chr.3: eQTL:222998;
• eQTL for latrophilin 2 (LPHN2):
  Chr.3: eQTL:222930;
• eQTL for peroxiredoxin 1 (PRDX1):
  Chr.3: eQTL:223041;
• eQTL for ATPase Na+/K+ transporting subunit alpha 2 (ATP1A2):
  Chr.3: eQTL:222921;
• eQTL for spermatogenesis associated 46 (SPATA46):
  Chr.3: eQTL:222917;
• eQTL for U6 spliceosomal RNA (LOC112446079):
  Chr.3: eQTL:223020;
• eQTL for calsequestrin 1 (CASQ1):
  Chr.3: eQTL:222987;
• eQTL for zinc finger protein 684 (ZNF684):
  Chr.3: eQTL:222855;
• eQTL for solute carrier family 2 member 1 (SLC2A1):
  Chr.3: eQTL:222914;
• eQTL for G protein-coupled receptor 141 (GPR141):
  Chr.4: eQTL:222872;
• eQTL for neuronal cell adhesion molecule (NRCAM):
  Chr.4: eQTL:222897;
• eQTL for amphiphysin (AMPH):
  Chr.4: eQTL:223006;
• eQTL for neuropeptide Y (NPY):
  Chr.4: eQTL:223043;
• eQTL for diacylglycerol kinase beta (DGKB):
  Chr.4: eQTL:222995;
• eQTL for small nucleolar RNA SNORA11 (LOC112446877):
  Chr.5: eQTL:223022;
• eQTL for U12 minor spliceosomal RNA (LOC112446886):
  Chr.5: eQTL:223011;
• eQTL for PHD finger protein 21B (PHF21B):
  Chr.5: eQTL:222901;
• eQTL for Y-box binding protein 3 (YBX3):
  Chr.5: eQTL:222915;
• eQTL for Wnt family member 1 (WNT1):
  Chr.5: eQTL:223056;
• eQTL for beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase (MGAT3):
  Chr.5: eQTL:222935;
• eQTL for meiotic double-stranded break formation protein 1 (MEI1):
  Chr.5: eQTL:222884;
• eQTL for synaptonemal complex protein 3 (SYCP3):
  Chr.5: eQTL:222875;
• eQTL for C-type lectin domain family 12 member B (CLEC12B):
  Chr.5: eQTL:222881;
• eQTL for Kv channel interacting protein 4 (KCNIP4):
  Chr.6: eQTL:223079;
• eQTL for epiregulin (EREG):
  Chr.6: eQTL:222918;
• eQTL for olfactory receptor family 2 subfamily C member 3 (OR2C3):
  Chr.7: eQTL:223082;
• eQTL for olfactory receptor family 2 subfamily C member 3B (OR2C3B):
  Chr.7: eQTL:223081;
• eQTL for early growth response 1 (EGR1):
  Chr.7: eQTL:222916;
• eQTL for alkaline ceramidase 1 (ACER1):
  Chr.7: eQTL:222907;
• eQTL for paired like homeodomain 1 (PITX1):
  Chr.7: eQTL:222887;
• eQTL for fibrillin 2 (FBN2):
  Chr.7: eQTL:222959;
• eQTL for complement C3 (C3):
  Chr.7: eQTL:222970;
• eQTL for obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (OBSCN):
  Chr.7: eQTL:223017;
• eQTL for FHF complex subunit HOOK interacting protein 2B (FHIP2B):
  Chr.8: eQTL:223055;
• eQTL for U1 spliceosomal RNA (LOC112447937):
  Chr.8: eQTL:223070;
• eQTL for FYVE, RhoGEF and PH domain containing 3 (FGD3):
  Chr.8: eQTL:222899;
• eQTL for tenascin C (TNC):
  Chr.8: eQTL:222856;
• eQTL for palladin, cytoskeletal associated protein (PALLD):
  Chr.8: eQTL:222863;
• eQTL for NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa pseudogene (LOC785629):
  Chr.8: eQTL:223080;
• eQTL for claudin 20 (CLDN20):
  Chr.9: eQTL:223075;
• eQTL for ryanodine receptor 3 (RYR3):
  Chr.10: eQTL:223003;
• eQTL for coiled-coil domain containing 196 (CCDC196):
  Chr.10: eQTL:223054;
• eQTL for tau tubulin kinase 2 (TTBK2):
  Chr.10: eQTL:222895;
• eQTL for arylsulfatase B (ARSB):
  Chr.10: eQTL:223046;
• eQTL for protogenin (PRTG):
  Chr.10: eQTL:223044;
• eQTL for small nucleolar RNA SNORA41 (LOC112448612):
  Chr.10: eQTL:223074;
• eQTL for progestin and adipoQ receptor family member 5 (PAQR5):
  Chr.10: eQTL:222989;
• eQTL for ZFP36 ring finger protein like 1 (ZFP36L1):
  Chr.10: eQTL:223001;
• eQTL for n/asmall nucleolar RNA SNORA42/SNORA80 family (LOC112448922):
  Chr.11: eQTL:223034;
• eQTL for neuralized E3 ubiquitin protein ligase 3 (NEURL3):
  Chr.11: eQTL:223040;
• eQTL for sprouty related EVH1 domain containing 2 (SPRED2):
  Chr.11: eQTL:222984;
• eQTL for glutamine--fructose-6-phosphate transaminase 1 (GFPT1):
  Chr.11: eQTL:222972;
• eQTL for MORN repeat containing 5 (MORN5):
  Chr.11: eQTL:223042;
• eQTL for StAR related lipid transfer domain containing 7 (STARD7):
  Chr.11: eQTL:222975;
• eQTL for prominin 2 (PROM2):
  Chr.11: eQTL:223038;
• eQTL for HCLS1 binding protein 3 (HS1BP3):
  Chr.11: eQTL:222962;
• eQTL for odd-skipped related transcription factor 1 (OSR1):
  Chr.11: eQTL:223045;
• eQTL for fms related receptor tyrosine kinase 3 (FLT3):
  Chr.12: eQTL:222978;
• eQTL for protocadherin 8 (PCDH8):
  Chr.12: eQTL:222974;
• eQTL for coiled-coil domain containing 70 (CCDC70):
  Chr.12: eQTL:222985;
• eQTL for lipopolysaccharide binding protein (LBP):
  Chr.13: eQTL:222968;
• eQTL for eukaryotic translation elongation factor 1 alpha 2 (EEF1A2):
  Chr.13: eQTL:222994;
• eQTL for junctional cadherin 5 associated (JCAD):
  Chr.13: eQTL:222866;
• eQTL for uncharacterized LOC100196900 (LOC100196900):
  Chr.13: eQTL:223032;
• eQTL for BPI fold containing family A, member 2B (BPIFA2B):
  Chr.13: eQTL:223062;
• eQTL for adipogenin (ADIG):
  Chr.13: eQTL:223071;
• eQTL for PR/SET domain 14 (PRDM14):
  Chr.14: eQTL:222852;
• eQTL for solute carrier organic anion transporter family member 5A1 (SLCO5A1):
  Chr.14: eQTL:223008;
• eQTL for adenylate cyclase 8 (ADCY8):
  Chr.14: eQTL:222951;
• eQTL for recombination activating 2 (RAG2):
  Chr.15: eQTL:223072;
• eQTL for Rho GTPase activating protein 20 (ARHGAP20):
  Chr.15: eQTL:222854;
• eQTL for ribosomal RNA processing 8 (RRP8):
  Chr.15: eQTL:222860;
• eQTL for apolipoprotein A4 (APOA4):
  Chr.15: eQTL:223063;
• eQTL for SET binding factor 2 (SBF2):
  Chr.15: eQTL:223025;
• eQTL for VPS26, retromer complex component B (VPS26B):
  Chr.15: eQTL:222952;
• eQTL for C1q and TNF related 5 (C1QTNF5):
  Chr.15: eQTL:223004;
• eQTL for adrenomedullin (ADM):
  Chr.15: eQTL:222992;
• eQTL for calpain 5 (CAPN5):
  Chr.15: eQTL:222889;
• eQTL for ferritin heavy chain 1 pseudogene (LOC782705):
  Chr.15: eQTL:222912;
• eQTL for inositol 1,4,5-triphosphate receptor associated 1 (IRAG1):
  Chr.15: eQTL:222902;
• eQTL for apolipoprotein C3 (APOC3):
  Chr.15: eQTL:223049;
• eQTL for dickkopf WNT signaling pathway inhibitor 3 (DKK3):
  Chr.15: eQTL:222880;
• eQTL for myelin protein zero like 2 (MPZL2):
  Chr.15: eQTL:223009;
• eQTL for leiomodin 1 (LMOD1):
  Chr.16: eQTL:222993;
• eQTL for BMP/retinoic acid inducible neural specific 2 (BRINP2):
  Chr.16: eQTL:222946;
• eQTL for N-acetylneuraminate pyruvate lyase (NPL):
  Chr.16: eQTL:222874;
• eQTL for calpain 2, (m/II) large subunit (CAPN2):
  Chr.16: eQTL:222937;
• eQTL for arylacetamide deacetylase like 3 (AADACL3):
  Chr.16: eQTL:223057;
• eQTL for prostaglandin-endoperoxide synthase 2 (PTGS2):
  Chr.16: eQTL:223052;
• eQTL for selectin E (SELE):
  Chr.16: eQTL:222904;
• eQTL for PPARGC1 and ESRR induced regulator, muscle 1 (PERM1):
  Chr.16: eQTL:222950;
• eQTL for SEC16 homolog B, endoplasmic reticulum export factor (SEC16B):
  Chr.16: eQTL:222862;
• eQTL for nitric oxide synthase 1 (NOS1):
  Chr.17: eQTL:222871;
• eQTL for phospholipase A2 group III (PLA2G3):
  Chr.17: eQTL:222928;
• eQTL for phospholipase A2 group IB (PLA2G1B):
  Chr.17: eQTL:223067;
• eQTL for sialic acid-binding Ig-like lectin 14 (LOC789748):
  Chr.18: eQTL:222983;
• eQTL for metallothionein 1E (MT1E):
  Chr.18: eQTL:223037;
• eQTL for engulfment and cell motility 3 (ELMO3):
  Chr.18: eQTL:222868;
• eQTL for testis expressed 101 (TEX101):
  Chr.18: eQTL:222967;
• eQTL for fat mass and obesity associated (FTO):
  Chr.18: eQTL:222932;
• eQTL for myosin XIX (MYO19):
  Chr.19: eQTL:222936;
• eQTL for galectin 9 (LGALS9):
  Chr.19: eQTL:222898;
• eQTL for microRNA mir-451 (MIR451):
  Chr.19: eQTL:223010;
• eQTL for collagen type I alpha 1 chain (COL1A1):
  Chr.19: eQTL:222939;
• eQTL for lactoperoxidase (LPO):
  Chr.19: eQTL:222938;
• eQTL for HID1 domain containing (HID1):
  Chr.19: eQTL:222923;
• eQTL for potassium voltage-gated channel subfamily H member 4 (KCNH4):
  Chr.19: eQTL:222865;
• eQTL for calcium voltage-gated channel auxiliary subunit gamma 1 (CACNG1):
  Chr.19: eQTL:222905;
• eQTL for vitronectin (VTN):
  Chr.19: eQTL:222964;
• eQTL for phosphodiesterase 6G (PDE6G):
  Chr.19: eQTL:223036;
• eQTL for TLC domain containing 2 (TLCD2):
  Chr.19: eQTL:223048;
• eQTL for cadherin 9 (CDH9):
  Chr.20: eQTL:223061;
• eQTL for iroquois homeobox 2 (IRX2):
  Chr.20: eQTL:223078;
• eQTL for ADAM metallopeptidase with thrombospondin type 1 motif 7 (ADAMTS7):
  Chr.21: eQTL:222870;
• eQTL for cathepsin G (LOC505658):
  Chr.21: eQTL:223073;
• eQTL for duodenase-1-like (LOC786126):
  Chr.21: eQTL:223050;
• eQTL for aggrecan (ACAN):
  Chr.21: eQTL:223060;
• eQTL for tetratricopeptide repeat domain 23 (TTC23):
  Chr.21: eQTL:222924;
• eQTL for NOVA alternative splicing regulator 1 (NOVA1):
  Chr.21: eQTL:222873;
• eQTL for aryl hydrocarbon receptor nuclear translocator 2 (ARNT2):
  Chr.21: eQTL:222931;
• eQTL for neurotrophic receptor tyrosine kinase 3 (NTRK3):
  Chr.21: eQTL:223035;
• eQTL for cholinergic receptor, nicotinic, alpha 7 (CHRNA7):
  Chr.21: eQTL:223059;
• eQTL for selenoprotein S (SELENOS):
  Chr.21: eQTL:222857;
• eQTL for myosin light chain 3 (MYL3):
  Chr.22: eQTL:222911;
• eQTL for musculoskeletal, embryonic nuclear protein 1 (MUSTN1):
  Chr.22: eQTL:223007;
• eQTL for zinc finger protein 311 (ZNF311):
  Chr.23: eQTL:222910;
• eQTL for cap methyltransferase 1 (CMTR1):
  Chr.23: eQTL:222969;
• eQTL for kinesin family member 6 (KIF6):
  Chr.23: eQTL:223068;
• eQTL for zinc finger and BTB domain containing 14 (ZBTB14):
  Chr.24: eQTL:223014;
• eQTL for cerebellin 2 precursor (CBLN2):
  Chr.24: eQTL:222894;
• eQTL for desmoglein 2 (DSG2):
  Chr.24: eQTL:222996;
• eQTL for lipoxygenase homology PLAT domains 1 (LOXHD1):
  Chr.24: eQTL:222954;
• eQTL for phosphorylase kinase catalytic subunit gamma 1 (PHKG1):
  Chr.25: eQTL:222908;
• eQTL for linker for activation of T cells family member 2 (LAT2):
  Chr.25: eQTL:223031;
• eQTL for ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 (ATP2A1):
  Chr.25: eQTL:222896;
• eQTL for proline rich acidic protein 1 (PRAP1):
  Chr.26: eQTL:222947;
• eQTL for DNA nucleotidylexotransferase (DNTT):
  Chr.26: eQTL:222990;
• eQTL for period circadian regulator 1 (PER1):
  Chr.26: eQTL:222878;
• eQTL for small nucleolar RNA SNORA79 (LOC112444564):
  Chr.26: eQTL:223030;
• eQTL for BCL2 interacting protein 3 (BNIP3):
  Chr.26: eQTL:222973;
• eQTL for DLC1 Rho GTPase activating protein (DLC1):
  Chr.27: eQTL:222963;
• eQTL for microtubule associated scaffold protein 1 (MTUS1):
  Chr.27: eQTL:223015;
• eQTL for ankyrin repeat domain 37 (ANKRD37):
  Chr.27: eQTL:222977;
• eQTL for actinin alpha 2 (ACTN2):
  Chr.28: eQTL:223047;
• eQTL for potassium two pore domain channel subfamily K member 16 (KCNK16):
  Chr.29: eQTL:222919;
• eQTL for cysteine and glycine rich protein 3 (CSRP3):
  Chr.29: eQTL:222927;
• eQTL for thyroid hormone responsive (THRSP):
  Chr.29: eQTL:222926;
• eQTL for protein tyrosine phosphatase non-receptor type 5 (PTPN5):
  Chr.29: eQTL:222988;
• eQTL for hepatic and glial cell adhesion molecule (HEPACAM):
  Chr.29: eQTL:222981;
• eQTL for troponin T3, fast skeletal type (TNNT3):
  Chr.29: eQTL:222997;

eQTL by their cis/trans acting types:

• Cis eQTL:
  222852, 222853, 222854, 222855, 222856, 222857, 222858, 222859, 222860, 222861, 222862, 222863, 222864, 222865, 222866, 222867, 222868, 222869, 222870, 222871, 222872, 222873, 222874, 222875, 222876, 222877, 222878, 222879, 222880, 222881, 222882, 222883, 222884, 222885, 222886, 222887, 222888, 222889, 222890, 222891, 222892, 222893, 222894, 222895, 222896, 222897, 222898, 222899, 222900, 222901, 222902, 222903, 222904, 222905, 222906, 222907, 222908, 222909, 222910, 222911, 222912, 222913, 222914, 222915, 222916, 222917, 222918, 222919, 222920, 222921, 222922, 222923, 222924, 222925, 222926, 222927, 222928, 222929, 222930, 222931, 222932, 222933, 222934, 222935, 222936, 222937, 222938, 222939, 222940, 222941, 222942, 222943, 222944, 222945, 222946, 222947, 222948, 222949, 222950, 222951, 222952, 222953, 222954, 222955, 222956, 222957, 222958, 222959, 222960, 222961, 222962, 222963, 222964, 222965, 222966, 222967, 222968, 222969, 222970, 222971, 222972, 222973, 222974, 222975, 222976, 222977, 222978, 222979, 222980, 222981, 222982, 222983, 222984, 222985, 222986, 222987, 222988, 222989, 222990, 222991, 222992, 222993, 222994, 222995, 222996, 222997, 222998, 222999, 223000, 223001, 223002, 223003, 223004, 223005, 223006, 223007, 223008, 223009, 223010, 223011, 223012, 223013, 223014, 223015, 223016, 223017, 223018, 223019, 223020, 223021, 223022, 223023, 223024, 223025, 223026, 223027, 223028, 223029, 223030, 223031, 223032, 223033, 223034, 223035, 223036, 223037, 223038, 223039, 223040, 223041, 223042, 223043, 223044, 223045, 223046, 223047, 223048, 223049, 223050, 223051, 223052, 223053, 223054, 223055, 223056, 223057, 223058, 223059, 223060, 223061, 223062, 223063, 223064, 223065, 223066, 223067, 223068, 223069, 223070, 223071, 223072, 223073, 223074, 223075, 223076, 223077, 223078, 223079, 223080, 223081, 223082.