Authors: Marina H, Pelayo R, Suárez-Vega A, Gutiérrez-Gil B, Esteban-Blanco C, Arranz JJ
(Contact: jjarrs@unileon.es ) Affiliation: Departamento de Producción Animal, Facultad de Veterinaria, Universidad de León, Campus de Vegazana s/n, León 24071, Spain Title: Genome-wide association studies (GWAS) and post-GWAS analyses for technological traits in Assaf and Churra dairy breeds Journal: Journal Of Dairy Science, S0022-0302(21)00839-0 (2021)
DOI :
S0022-0302(21)00839-0 Links:
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Milk yield
Chr.4 : Asso:224732 . Chr.6 : Asso:224733 , Asso:224842 . Chr.13 : Asso:224734 , Asso:224735 , Asso:224844 . Chr.15 : Asso:224736 . Chr.26 : Asso:224737 .
QTL for Milk fat percentage
Chr.1 : Asso:224738 . Chr.4 : Asso:224739 . Chr.18 : Asso:224774 . Chr.22 : Asso:224775 . Chr.23 : Asso:224814 . Chr.24 : Asso:224740 .
QTL for Milk fat yield
Chr.1 : Asso:224776 . Chr.2 : Asso:224741 . Chr.6 : Asso:224742 . Chr.10 : Asso:224777 . Chr.13 : Asso:224743 , Asso:224845 . Chr.15 : Asso:224744 . Chr.25 : Asso:224778 . Chr.26 : Asso:224745 .
QTL for Milk protein percentage
Chr.3 : Asso:224779 , Asso:224780 . Chr.6 : Asso:224781 . Chr.14 : Asso:224782 . Chr.15 : Asso:224810 . Chr.26 : Asso:224746 .
QTL for Milk protein yield
Chr.2 : Asso:224747 . Chr.3 : Asso:224783 . Chr.6 : Asso:224748 , Asso:224843 . Chr.13 : Asso:224749 , Asso:224846 . Chr.15 : Asso:224750 . Chr.20 : Asso:224784 . Chr.26 : Asso:224751 , Asso:224785 .
QTL for Somatic cell count
Chr.1 : Asso:224786 . Chr.17 : Asso:224752 . Chr.19 : Asso:224753 . Chr.23 : Asso:224787 .
QTL for Rennet coagulation time
Chr.1 : Asso:224754 . Chr.9 : Asso:224788 , Asso:224815 , Asso:224847 .
QTL for Curd firming time
Chr.6 : Asso:224789 . Chr.8 : Asso:224790 . Chr.9 : Asso:224791 . Chr.11 : Asso:224816 . Chr.12 : Asso:224755 . Chr.21 : Asso:224792 . Chr.26 : Asso:224793 .
QTL for Curd firmness
Chr.1 : Asso:224757 , Asso:224758 , Asso:224759 , Asso:224760 . Chr.3 : Asso:224761 . Chr.6 : Asso:224768 , Asso:224769 , Asso:224772 . Chr.7 : Asso:224756 . Chr.9 : Asso:224848 . Chr.11 : Asso:224770 . Chr.25 : Asso:224771 , Asso:224773 .
QTL for Cheese yield
Chr.1 : Asso:224817 . Chr.2 : Asso:224762 , Asso:224818 , Asso:224819 . Chr.3 : Asso:224794 . Chr.4 : Asso:224820 , Asso:224821 , Asso:224822 . Chr.5 : Asso:224795 . Chr.7 : Asso:224824 , Asso:224823 . Chr.8 : Asso:224825 . Chr.9 : Asso:224826 . Chr.10 : Asso:224796 , Asso:224797 , Asso:224827 . Chr.11 : Asso:224828 , Asso:224829 . Chr.12 : Asso:224798 , Asso:224799 , Asso:224830 . Chr.13 : Asso:224811 , Asso:224831 . Chr.14 : Asso:224763 , Asso:224800 . Chr.15 : Asso:224801 , Asso:224832 , Asso:224833 . Chr.16 : Asso:224834 . Chr.18 : Asso:224802 , Asso:224835 . Chr.22 : Asso:224836 . Chr.23 : Asso:224812 . Chr.24 : Asso:224764 , Asso:224803 . Chr.25 : Asso:224765 , Asso:224804 .
QTL for Dried curd yield
Chr.3 : Asso:224805 , Asso:224806 . Chr.4 : Asso:224837 . Chr.8 : Asso:224838 , Asso:224839 . Chr.9 : Asso:224807 . Chr.13 : Asso:224813 . Chr.14 : Asso:224766 . Chr.16 : Asso:224840 . Chr.18 : Asso:224841 . Chr.19 : Asso:224808 . Chr.24 : Asso:224809 . Chr.25 : Asso:224767 .
QTL/association Reported by chromosomes:
Chr.1 (9) ,
Chr.2 (5) ,
Chr.3 (7) ,
Chr.4 (6) ,
Chr.5 (1) ,
Chr.6 (10) ,
Chr.7 (3) ,
Chr.8 (4) ,
Chr.9 (7) ,
Chr.10 (4) ,
Chr.11 (4) ,
Chr.12 (4) ,
Chr.13 (10) ,
Chr.14 (4) ,
Chr.15 (7) ,
Chr.16 (2) ,
Chr.17 (1) ,
Chr.18 (4) ,
Chr.19 (2) ,
Chr.20 (1) ,
Chr.21 (1) ,
Chr.22 (2) ,
Chr.23 (3) ,
Chr.24 (4) ,
Chr.25 (6) ,
Chr.26 (6) .
Pleiotropic QTL found:
BTA1_67.7 Chr.1 BTA2_35 Chr.2 BTA6_104.25 Chr.6 BTA6_85 Chr.6 BTA6_104.24 Chr.6 BTA9_30 Chr.9 BTA13_57.89 Chr.13 BTA13_18 Chr.13 BTA13_57.90 Chr.13 BTA14_60 Chr.14 BTA15_43 Chr.15 BTA25_35 Chr.25 BTA26_33.6 Chr.26
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Marina H, Pelayo R, Suárez-Vega A, Gutiérrez-Gil B, Esteban-Blanco C, Arranz JJ (2021). Genome-wide association studies (GWAS) and post-GWAS analyses for technological traits in Assaf and Churra dairy breeds. Journal of dairy science, S0022-0302(21)00839-0;
Curated into QTLdb on 2021-09-17. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=MoJj6Q6DnQ
OR
Marina H, Pelayo R, Suárez-Vega A, Gutiérrez-Gil B, Esteban-Blanco C, Arranz JJ (2021). Genome-wide association studies (GWAS) and post-GWAS analyses for technological traits in Assaf and Churra dairy breeds. Journal of dairy science, S0022-0302(21)00839-0; DOI: https://dx.doi.org/S0022-0302(21)00839-0
