Cattle QTL Database

Release 56
(Apr 24, 2025)

Curators: Cari Park /
Curated: 2024-03-04
Updated:

Publication # 38601075 Details

Authors:	Siberski-Cooper CJ, Mayes MS, Gorden PJ, Kramer L, Bhatia V, Koltes JE (Contact: jekoltes@iastate.edu)
Affiliation:	Department of Animal Science, Iowa State University, Ames, IA 50011; Veterinary Diagnostic & Production Animal Medicine, Iowa State University, Ames, IA 50011
Title:	The genetic architecture of complete blood counts in lactating Holstein dairy cows
Journal:	Frontiers In Genetics, 15:1360295 (2024)	DOI: 10.3389/fvets.2020.00340
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome There are 5 QTL/association on this publication are currently "Obsolete" by the data owner or curator. Please write to Bioinfo-Team@animalgenome.org with the URL address of this page for assistance (for example, if you are a reviewer of a manuscript citing this address as data deposit point). Number of QTL/association reported by traits: QTL for Basophil number reported for chromosome(s): Chr.5: QTL:288076. Chr.15: QTL:288072. Chr.17: QTL:288071. Chr.18: QTL:288073, QTL:288077. Chr.19: QTL:288074, QTL:288075. Chr.20: QTL:288070. QTL for Eosinophil number reported for chromosome(s): Chr.X: QTL:288080. Chr.1: QTL:288079. Chr.5: QTL:288085. Chr.7: QTL:288083. Chr.11: QTL:288088. Chr.13: QTL:288078. Chr.14: QTL:288086. Chr.18: QTL:288081. Chr.19: QTL:288082, QTL:288087. Chr.28: QTL:288084. QTL for Hematocrit reported for chromosome(s): Chr.X: QTL:288091. Chr.11: QTL:288090. Chr.15: QTL:288092, QTL:288093. Chr.25: QTL:288089. QTL for Hemoglobin reported for chromosome(s): Chr.X: QTL:288096. Chr.11: QTL:288095. Chr.15: QTL:288097. Chr.25: QTL:288094. QTL for Large unstained cell number reported for chromosome(s): Chr.13: QTL:288098. QTL for Lymphocyte number reported for chromosome(s): Chr.4: QTL:288105. Chr.5: QTL:288100. Chr.11: QTL:288099. Chr.15: QTL:288104. Chr.17: QTL:288102, QTL:288103. Chr.19: QTL:288107. Chr.20: QTL:288106. Chr.23: QTL:288108, QTL:288109. Chr.29: QTL:288101. QTL for Mean corpuscular hemoglobin content reported for chromosome(s): Chr.5: QTL:288110, QTL:288114. Chr.12: QTL:288112. Chr.19: QTL:288113, QTL:288115. Chr.22: QTL:288111. QTL for Mean corpuscular hemoglobin concentration reported for chromosome(s): Chr.5: QTL:288116. Chr.12: QTL:288118, QTL:288119, QTL:288172, QTL:288173. Chr.18: QTL:288121. Chr.21: QTL:288117, QTL:288120. QTL for Mean corpuscular volume reported for chromosome(s): Chr.5: QTL:288122. Chr.8: QTL:288124. Chr.10: QTL:288125. Chr.17: QTL:288123. QTL for Mean platelet volume reported for chromosome(s): Chr.X: QTL:288195, QTL:288196. Chr.5: QTL:288127, QTL:288132, QTL:288133. Chr.8: QTL:288130. Chr.9: QTL:288126. Chr.11: QTL:288134. Chr.13: QTL:288135. Chr.22: QTL:288131. Chr.24: QTL:288128. Chr.28: QTL:288129. QTL for Monocyte number reported for chromosome(s): Chr.5: QTL:288137. Chr.9: QTL:288136, QTL:288138. Chr.11: QTL:288142. Chr.18: QTL:288140. Chr.23: QTL:288143. Chr.27: QTL:288141. Chr.28: QTL:288139. QTL for Neutrophil number reported for chromosome(s): Chr.3: QTL:288145. Chr.5: QTL:288146. Chr.27: QTL:288144. Chr.28: QTL:288147. Chr.29: QTL:288148. QTL for Platelet number reported for chromosome(s): Chr.10: QTL:288149. Chr.27: QTL:288150. Chr.28: QTL:288151. QTL for Red blood cell number reported for chromosome(s): Chr.3: QTL:288157. Chr.11: QTL:288156, QTL:288159, QTL:288160. Chr.12: QTL:288155. Chr.13: QTL:288152. Chr.15: QTL:288154. Chr.29: QTL:288153, QTL:288158. QTL for Red blood cell distribution width reported for chromosome(s): Chr.X: QTL:288163. Chr.2: QTL:288165. Chr.6: QTL:288162, QTL:288166. Chr.14: QTL:288164. Chr.16: QTL:288161. QTL for White blood cell number reported for chromosome(s): Chr.4: QTL:288169. Chr.9: QTL:288171. Chr.19: QTL:288167. Chr.21: QTL:288168. Chr.29: QTL:288170. QTL/association Reported by chromosomes: Chr.X (6), Chr.1 (1), Chr.2 (1), Chr.3 (2), Chr.4 (2), Chr.5 (12), Chr.6 (2), Chr.7 (1), Chr.8 (2), Chr.9 (4), Chr.10 (2), Chr.11 (9), Chr.12 (6), Chr.13 (4), Chr.14 (2), Chr.15 (6), Chr.16 (1), Chr.17 (4), Chr.18 (5), Chr.19 (8), Chr.20 (2), Chr.21 (3), Chr.22 (2), Chr.23 (3), Chr.24 (1), Chr.25 (2), Chr.27 (3), Chr.28 (5), Chr.29 (5). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Siberski-Cooper CJ, Mayes MS, Gorden PJ, Kramer L, Bhatia V, Koltes JE (2024). The genetic architecture of complete blood counts in lactating Holstein dairy cows. Frontiers in Genetics, 15:1360295; Curated into QTLdb on 2024-03-04. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=OiZx9K3QqF

Siberski-Cooper CJ, Mayes MS, Gorden PJ, Kramer L, Bhatia V, Koltes JE (2024). The genetic architecture of complete blood counts in lactating Holstein dairy cows. Frontiers in Genetics, 15:1360295; DOI: https://dx.doi.org/10.3389/fvets.2020.00340

Publication # 38601075 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: