Chicken QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2021-02-17
Updated: 2024-04-23

Publication # 32849779 Details

Authors:	Walugembe M, Amuzu-Aweh EN, Botchway PK, Naazie A, Aning G, Wang Y, Saelao P, Kelly T, Gallardo RA, Zhou H, Lamont SJ, Kayang BB, Dekkers JCM (Contact: jdekkers@iastate.edu)
Affiliation:	Feed the Future Innovation Lab for Genomics to Improve Poultry, Department of Animal Science, University of California, Davis, Davis, CA, United States
Title:	Genetic Basis of Response of Ghanaian Local Chickens to Infection With a Lentogenic Newcastle Disease Virus
Journal:	Frontiers In Genetics, 11: 739 (2020)	DOI: 10.3389/fgene.2020.00739
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Average daily gain reported for chromosome(s): Chr.Z: Asso:218337. Chr.1: QTL:218281, QTL:218290, QTL:218294, Asso:218339. Chr.2: QTL:218282, QTL:218283, QTL:218291, QTL:218295, Asso:218340. Chr.4: QTL:218292. Chr.5: QTL:218287. Chr.6: QTL:218293. Chr.11: QTL:218289. Chr.14: QTL:218285. Chr.15: QTL:218280, Asso:218336. Chr.21: QTL:218284, QTL:218288. Chr.27: QTL:218286, Asso:218338. QTL for Antibody titer to Newcastle disease virus reported for chromosome(s): Chr.1: QTL:218298, QTL:218305. Chr.2: QTL:218303, Asso:218343. Chr.4: QTL:218297. Chr.7: QTL:218300, Asso:218342. Chr.13: QTL:218301, QTL:218302. Chr.17: QTL:218296, Asso:218341. Chr.21: QTL:218299. QTL for Viral load, Newcastle Disease Virus reported for chromosome(s): Chr.1: QTL:218307, QTL:218315, Asso:218344, Asso:218345. Chr.2: QTL:218306, QTL:218318, QTL:218326. Chr.4: QTL:218322. Chr.5: QTL:218319, QTL:218328, Asso:218347. Chr.7: QTL:218316, QTL:218320, Asso:218349. Chr.8: QTL:218312. Chr.9: QTL:218323, Asso:218348. Chr.10: QTL:218311, QTL:218321, QTL:218324. Chr.11: QTL:218314. Chr.12: QTL:218325. Chr.13: QTL:218304, QTL:218309, QTL:218313, QTL:218317. Chr.15: QTL:218310. Chr.19: QTL:218327. Chr.21: Asso:218346. Chr.27: QTL:218308. QTL for Viral clearance reported for chromosome(s): Chr.1: QTL:218333. Chr.2: QTL:218330, QTL:218332, Asso:218350. Chr.3: QTL:218335. Chr.4: Asso:218351. Chr.9: QTL:218329, Asso:218352. Chr.19: QTL:218331. Chr.21: QTL:218334. QTL/association Reported by chromosomes: Chr.Z (1), Chr.1 (11), Chr.2 (13), Chr.3 (1), Chr.4 (4), Chr.5 (4), Chr.6 (1), Chr.7 (5), Chr.8 (1), Chr.9 (4), Chr.10 (3), Chr.11 (2), Chr.12 (1), Chr.13 (6), Chr.14 (1), Chr.15 (3), Chr.17 (2), Chr.19 (2), Chr.21 (5), Chr.27 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Walugembe M, Amuzu-Aweh EN, Botchway PK, Naazie A, Aning G, Wang Y, Saelao P, Kelly T, Gallardo RA, Zhou H, Lamont SJ, Kayang BB, Dekkers JCM (2020). Genetic Basis of Response of Ghanaian Local Chickens to Infection With a Lentogenic Newcastle Disease Virus. Frontiers in genetics, 11: 739; Curated into QTLdb on 2021-02-17. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=RjCw3Z8YbJ

Walugembe M, Amuzu-Aweh EN, Botchway PK, Naazie A, Aning G, Wang Y, Saelao P, Kelly T, Gallardo RA, Zhou H, Lamont SJ, Kayang BB, Dekkers JCM (2020). Genetic Basis of Response of Ghanaian Local Chickens to Infection With a Lentogenic Newcastle Disease Virus. Frontiers in genetics, 11: 739; DOI: https://dx.doi.org/10.3389/fgene.2020.00739

Publication # 32849779 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: