Pig QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2015-04-15
Updated: 2024-04-23

Publication # 25071839 Details

Authors:	Kogelman LJ, Pant SD, Fredholm M, Kadarmideen HN (Contact: hajak@sund.ku.dk)
Affiliation:	Animal Genetics, Bioinformatics and Breeding Section, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen Copenhagen, Denmark
Title:	Systems genetics of obesity in an F2 pig model by genome-wide association, genetic network, and pathway analyses
Journal:	Frontiers In Genetics, 5: 214 (2014)	DOI: 10.3389/fgene.2014.00214
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Obesity index reported for chromosome(s): Chr.1: Asso:55723, Asso:55731, Asso:55732, Asso:55736, Asso:55738, Asso:55758, Asso:55761, Asso:55762, Asso:55763, Asso:55764, Asso:55782, Asso:55784, Asso:55797, Asso:55798, Asso:55799, Asso:55801, Asso:55802, Asso:55804, Asso:55805, Asso:55807, Asso:55808, Asso:55811, Asso:55815, Asso:55817, Asso:55820, Asso:55822, Asso:55827, Asso:55835, Asso:55836, Asso:55837, Asso:55838, Asso:55854. Chr.2: Asso:55720, Asso:55727, Asso:55733, Asso:55749, Asso:55755, Asso:55759, Asso:55765, Asso:55771, Asso:55776, Asso:55777, Asso:55778, Asso:55810, Asso:55813, Asso:55818, Asso:55824, Asso:55850, Asso:55851. Chr.3: Asso:55775, Asso:55828, Asso:55829, Asso:55830, Asso:55831. Chr.4: Asso:55724, Asso:55740, Asso:55742, Asso:55779, Asso:55816. Chr.5: Asso:55821. Chr.6: Asso:55823, Asso:55848. Chr.7: Asso:55719, Asso:55729, Asso:55752, Asso:55757, Asso:55767, Asso:55768, Asso:55769, Asso:55770, Asso:55789, Asso:55790, Asso:55791, Asso:55792, Asso:55793, Asso:55794, Asso:55852. Chr.8: Asso:55722, Asso:55725, Asso:55751, Asso:55772, Asso:55774, Asso:55780, Asso:55787, Asso:55796, Asso:55847. Chr.9: Asso:55726. Chr.10: Asso:55730, Asso:55741. Chr.11: Asso:55721, Asso:55750, Asso:55760. Chr.12: Asso:55753, Asso:55756, Asso:55781, Asso:55806, Asso:55809, Asso:55812, Asso:55834, Asso:55840, Asso:55846. Chr.13: Asso:55739, Asso:55746, Asso:55788, Asso:55795, Asso:55800, Asso:55841, Asso:55842, Asso:55844. Chr.14: Asso:55728, Asso:55734, Asso:55735, Asso:55737, Asso:55744, Asso:55748, Asso:55754, Asso:55766, Asso:55773, Asso:55783, Asso:55786, Asso:55803, Asso:55814, Asso:55825, Asso:55826, Asso:55832, Asso:55833, Asso:55845, Asso:55849. Chr.15: Asso:55743, Asso:55745, Asso:55747, Asso:55819, Asso:55843. Chr.17: Asso:55785, Asso:55839, Asso:55853. QTL/association Reported by chromosomes: Chr.1 (32), Chr.2 (17), Chr.3 (5), Chr.4 (5), Chr.5 (1), Chr.6 (2), Chr.7 (15), Chr.8 (9), Chr.9 (1), Chr.10 (2), Chr.11 (3), Chr.12 (9), Chr.13 (8), Chr.14 (19), Chr.15 (5), Chr.17 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Kogelman LJ, Pant SD, Fredholm M, Kadarmideen HN (2014). Systems genetics of obesity in an F2 pig model by genome-wide association, genetic network, and pathway analyses. Frontiers in genetics, 5: 214; Curated into QTLdb on 2015-06-03. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=RwDt4T8DrM

Kogelman LJ, Pant SD, Fredholm M, Kadarmideen HN (2014). Systems genetics of obesity in an F2 pig model by genome-wide association, genetic network, and pathway analyses. Frontiers in genetics, 5: 214; DOI: https://dx.doi.org/10.3389/fgene.2014.00214

Publication # 25071839 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: