Pig QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2020-07-17
Updated: 2024-04-23

Publication # 32038708 Details

Authors:	Keel BN, Snelling WM, Lindholm-Perry AK, Oliver WT, Kuehn LA, Rohrer GA (Contact: brittney.keel@ars.usda.gov)
Affiliation:	USDA, ARS, U.S. Meat Animal Research Center, Clay Center, NE, United States
Title:	Using SNP Weights Derived From Gene Expression Modules to Improve GWAS Power for Feed Efficiency in Pigs.
Journal:	Front Genet, 10:1339 (2020)	DOI: 10.3389/fgene.2019.01339
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Feed efficiency reported for chromosome(s): Chr.X: Asso:211976, Asso:211977, Asso:211978. Chr.2: Asso:211989. Chr.4: Asso:211990, Asso:211999. Chr.5: Asso:211979. Chr.6: Asso:212008, Asso:212009. Chr.7: Asso:211980, Asso:211981, Asso:211982. Chr.8: Asso:211983, Asso:211991, Asso:211992, Asso:211993, Asso:212004, Asso:212006. Chr.9: Asso:211984, Asso:211985, Asso:211986, Asso:211987, Asso:211994, Asso:211995, Asso:211996, Asso:211997, Asso:212000, Asso:212001, Asso:212002, Asso:212007. Chr.13: Asso:211966, Asso:211967. Chr.14: Asso:211968, Asso:211988. Chr.15: Asso:211969, Asso:211970, Asso:211971, Asso:211972, Asso:211998. Chr.18: Asso:211973, Asso:211974, Asso:211975, Asso:212003, Asso:212005. QTL/association Reported by chromosomes: Chr.X (3), Chr.2 (1), Chr.4 (2), Chr.5 (1), Chr.6 (2), Chr.7 (3), Chr.8 (6), Chr.9 (12), Chr.13 (2), Chr.14 (2), Chr.15 (5), Chr.18 (5). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Keel BN, Snelling WM, Lindholm-Perry AK, Oliver WT, Kuehn LA, Rohrer GA (2020). Using SNP Weights Derived From Gene Expression Modules to Improve GWAS Power for Feed Efficiency in Pigs.. Front Genet, 10:1339; Curated into QTLdb on 2020-07-22. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=YzUa3W1WhB

Keel BN, Snelling WM, Lindholm-Perry AK, Oliver WT, Kuehn LA, Rohrer GA (2020). Using SNP Weights Derived From Gene Expression Modules to Improve GWAS Power for Feed Efficiency in Pigs.. Front Genet, 10:1339; DOI: https://dx.doi.org/10.3389/fgene.2019.01339

Publication # 32038708 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: