Cattle QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2020-02-07
Updated: 2024-04-23

Publication # 32194633 Details

Authors:	Shi KR, Niu FG, Zhang Q, Ning C, Yue SJ, Hu CZ, Xu ZJ, Wang SX, Li RR, Hou QL, Wang ZH (Contact: krshi@sdau.edu.cn)
Affiliation:	College of Animal Science and Technology, Shandong Agricultural University, Shandong Key Laboratory of Animal Bioengineering and Disease Prevention, Taian, Shandong, 271018, P. R. China
Title:	Identification of whole-genome significant single nucleotide polymorphisms in candidate genes associated with serum biochemical traits in Chinese Holstein cattle
Journal:	Frontiers In Genetics, 11:163 (2020)	DOI: 10.3389/fgene.2020.00163
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Alkaline phosphatase level reported for chromosome(s): Chr.5: Asso:193221, Asso:193222, Asso:193223, Asso:193224, Asso:193225, Asso:193226. Chr.9: Asso:193227. Chr.17: Asso:193228. Chr.23: Asso:193229. Chr.28: Asso:193230, Asso:193231, Asso:193232. QTL for Alanine transaminase level reported for chromosome(s): Chr.26: Asso:193233. QTL for Aspartate aminotransferase level reported for chromosome(s): Chr.26: Asso:193234. QTL for Cholinesterase level reported for chromosome(s): Chr.1: Asso:193235, Asso:193236. Chr.8: Asso:193237. Chr.9: Asso:193238. Chr.19: Asso:193239. Chr.29: Asso:193240, Asso:193241. QTL for Direct bilirubin level reported for chromosome(s): Chr.4: Asso:193242. Chr.14: Asso:193243. Chr.15: Asso:193244. Chr.18: Asso:193245. Chr.26: Asso:193246. QTL for Gamma-glutamyl transferase level reported for chromosome(s): Chr.26: Asso:193247. QTL for HDL cholesterol level reported for chromosome(s): Chr.8: Asso:193248. Chr.23: Asso:193249. QTL for Lactate dehydrogenase level reported for chromosome(s): Chr.1: Asso:193250. QTL for LDL cholesterol level reported for chromosome(s): Chr.1: Asso:193251. Chr.5: Asso:193252, Asso:193253. Chr.7: Asso:193254, Asso:193255, Asso:193256. Chr.8: Asso:193257, Asso:193258, Asso:193259, Asso:193260, Asso:193261, Asso:193262, Asso:193263. Chr.9: Asso:193264. Chr.10: Asso:193265, Asso:193266, Asso:193267, Asso:193268. Chr.13: Asso:193269. Chr.22: Asso:193270, Asso:193271. Chr.27: Asso:193272. QTL for Total bilirubin level reported for chromosome(s): Chr.X: Asso:193295, Asso:193296, Asso:193297, Asso:193298. Chr.2: Asso:193273. Chr.7: Asso:193274, Asso:193275, Asso:193276, Asso:193277, Asso:193278. Chr.14: Asso:193279, Asso:193280, Asso:193281, Asso:193282, Asso:193283. Chr.15: Asso:193284, Asso:193285, Asso:193286, Asso:193287. Chr.18: Asso:193288, Asso:193289, Asso:193290. Chr.22: Asso:193291. Chr.23: Asso:193292. Chr.28: Asso:193293, Asso:193294. QTL for Cholesterol level reported for chromosome(s): Chr.X: Asso:193301. Chr.5: Asso:193299. Chr.26: Asso:193300. QTL/association Reported by chromosomes: Chr.X (5), Chr.1 (4), Chr.2 (1), Chr.4 (1), Chr.5 (9), Chr.7 (8), Chr.8 (9), Chr.9 (3), Chr.10 (4), Chr.13 (1), Chr.14 (6), Chr.15 (5), Chr.17 (1), Chr.18 (4), Chr.19 (1), Chr.22 (3), Chr.23 (3), Chr.26 (5), Chr.27 (1), Chr.28 (5), Chr.29 (2). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Shi KR, Niu FG, Zhang Q, Ning C, Yue SJ, Hu CZ, Xu ZJ, Wang SX, Li RR, Hou QL, Wang ZH (2020). Identification of whole-genome significant single nucleotide polymorphisms in candidate genes associated with serum biochemical traits in Chinese Holstein cattle. Frontiers in Genetics, 11:163; Curated into QTLdb on 2020-02-07. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=DwDs9Y9WzZ

Shi KR, Niu FG, Zhang Q, Ning C, Yue SJ, Hu CZ, Xu ZJ, Wang SX, Li RR, Hou QL, Wang ZH (2020). Identification of whole-genome significant single nucleotide polymorphisms in candidate genes associated with serum biochemical traits in Chinese Holstein cattle. Frontiers in Genetics, 11:163; DOI: https://dx.doi.org/10.3389/fgene.2020.00163

Publication # 32194633 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: