| QTL Map Information |
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| Chromosome: | 19 |
| QTL Peak Location: | 92.54 (cM) |
| QTL Span: | 92.54-92.54 (cM)
50.8-50.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41920005 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.06 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | FASN (fatty acid synthase) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Japanese Black cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip v2 and analyzed for carcass traits, fatty acid composition, chemical composition, and sugar content. A total of 40,657 SNPs on the array were used for analysis, in addition to SNPs in five candidate genes. |
| Analysis: | A linear mixed model was used. |
| Software: | PLINK, GEMA, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sasago N, Abe T, Sakuma H, Kojima T, Uemoto Y |
| Affiliation: | National Livestock Breeding Center, Nishigo, Fukushima, Japan |
| Title: | Genome-wide association study for carcass traits, fatty acid composition, chemical composition, sugar, and the effects of related candidate genes in Japanese Black cattle |
| Journal: | Animal science journal = Nihon chikusan Gakkaiho, 2016, 88(1):33-44 |
| Links: |
PubMed | Abstract | List all data
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