| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 92.56 (cM) |
| QTL Span: | 92.56-92.56 (cM)
50.8-50.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41919992 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.0001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | FASN (fatty acid synthase) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #120193
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in FASN, PPARGC1A, ABCG2, and IGF1 and analyzed for milk fatty acid composition traits. |
| Analysis: | The mixed procedure was used with an animal model. |
| Software: | SAS, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li C, Sun D, Zhang S, Yang S, Alim MA, Zhang Q, Li Y, Liu L |
| Affiliation: | Beijing Dairy Cattle Center, Beijing, 100085, China |
| Title: | Genetic effects of FASN, PPARGC1A, ABCG2 and IGF1 revealing the association with milk fatty acids in a Chinese Holstein cattle population based on a post genome-wide association study |
| Journal: | BMC genetics, 2016, 17: 110 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #27468856
Add your comments
Note similar findings
Note contradictions
|
