| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 92.64 (cM) |
| QTL Span: | 92.50-92.77 (cM)
50.8-50.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs41921133 |
| Peak: | |
| Lower, "Significant": | rs41925643 |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip, and CNV regions were identified and analyzed for association with EBV for somatic cell score. |
| Analysis: | A linear regression model was used. |
| Software: | SVS 8.3.1, PennCNV, CNVRuler, BedTools |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Durán AM, Román Ponce SI, Ruiz López FJ, González Padilla E, Vásquez Peláez CG, Bagnato A, Strillacci MG |
| Affiliation: | Department of Veterinary Medicine (DiMeVet), University of Milan, Milan, Italy |
| Title: | Genome-wide association study for milk somatic cell score in holstein cattle using copy number variation as markers |
| Journal: | Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie, 2016, 134(1):49-59 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | EBV; identified by PennCNV-CNVRuler |
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