| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 130.52 (cM) |
| QTL Span: | 130.52-130.52 (cM)
135.9-135.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CEP63 (centrosomal protein 63) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #153902
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped for 164,312 SNPs and 13,746 haplotype blocks and analyzed for milk yield. |
| Analysis: | GWAS was performed using a haplotype-based empirical Bayesian model. |
| Software: | BLUPF90, SAMtools, Beagle, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Chen Z, Yao Y, Ma P, Wang Q, Pan Y |
| Affiliation: | Shanghai Key Laboratory of Veterinary Biotechnology, Shanghai, PR China |
| Title: | Haplotype-based genome-wide association study identifies loci and candidate genes for milk yield in Holsteins |
| Journal: | PloS one, 2018, 13(2): e0192695 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | EBV |
User inputs on reference #29447209
Add your comments
Note similar findings
Note contradictions
|
