Release 56
(Apr 24, 2025)

QTL 153957 Description:

 Trait Information
Trait name: Residual feed intake Vertebrate Trait Ontology: Food intake trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: RFI Clinical Measurement Ontology: Residual feed intake
 QTL Map Information
Chromosome:2
QTL Peak Location:1.51 (cM)
QTL Span:1.51-1.51 (cM)
1.7-1.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109382589
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.036
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SMARCAL1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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    •  QTL Experiment in Brief
    Animals:Animals were Angus, Hereford, and Angus-Hereford crossbred cattle.
     Breeds associated:
    Design:Animals were genotyped using a panel of 216 SNPs in candidate regions and analyzed for feed efficiency related traits. A total of 159 SNPs were ultimately used for analysis.
    Analysis:Three models were used to evaluate SNP associations, including allele substitution effects, genotypic, and additive/dominance models.
    Software:PLINK, ASReml, GVCBLUP
    Notes: 
    Links:Edit

     Reference
    Authors:Abo-Ismail M K, Lansink N, Akanno E, Karisa B K, Crowley J J, Moore S S, Bork E, Stothard P, Basarab J A, Plastow G S
    Affiliation:Livestock Gentec at University of Alberta, Edmonton, AB, Canada
    Title:Development and validation of a small SNP panel for feed efficiency in beef cattle
    Journal:Journal of animal science, 2018, 96(2): 375-397
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:adjusted for backfat
    User inputs on reference #29390120
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    • Cite this Data:

    Animal QTLdb: QTL153957 was published in 2018, and was curated into QTLdb on 2018-04-03. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:153957

     

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