| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 22.8 (cM) |
| QTL Span: | 22.87-23.07 (cM)
15.0-15.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | HSP90AB1 (heat shock protein 90kDa alpha (cytosolic), class B member 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Bos taurus (crossbred Holstein Friesian) and Bos indicus (Thai native cattle, White Lamphun, and Mountain cattle) in Thailand. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped for nine polymorphisms in HSP90AB1 and analyzed for heat tolerance traits. |
| Analysis: | Association analyses via regression on individual SNP genotypes, a repeated gene substitution MIXED model, and least square means were performed. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Charoensook R, Gatphayak K, Sharifi AR, Chaisongkram C, Brenig B, Knorr C |
| Affiliation: | Institute of Veterinary Medicine, Georg-August-University Göttingen, 37077, Göttingen, Germany. |
| Title: | Polymorphisms in the bovine HSP90AB1 gene are associated with heat tolerance in Thai indigenous cattle |
| Journal: | Trop Anim Health Prod, 2012, 44(4): 921-8 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | SNP03 |
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