Release 56
(Apr 24, 2025)

QTL 164870 Description:

 Trait Information
Trait name: Milk yield Vertebrate Trait Ontology: Milk amount
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: MY Clinical Measurement Ontology: Milk yield
 QTL Map Information
Chromosome:14
QTL Peak Location:0.83 (cM)
QTL Span:0.72-0.94 (cM)
0.5-0.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs208091850
Peak:rs133033480
Lower, "Significant":rs137205809
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein, Nordic Red, and Jersey cattle.
     Breeds associated:
    Design:Animals were genotyped using a 50K SNP chip, with data imputed to HD and whole-genome sequence level, and analyzed for milk production, mastitis, health, and fertility traits.
    Analysis:Single-marker GWAS was conducted using a two-step variance component-based method.
    Software:EMMAX, IMPUTE2 v2.3.1
    Notes: 
    Links:Edit

     Reference
    Authors:Fang L, Sørensen P, Sahana G, Panitz F, Su G, Zhang S, Yu Y, Li B, Ma L, Liu G, Lund MS, Thomsen B
    Affiliation:Section for Molecular Genetics and Systems Biology, Department of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark
    Title:MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle
    Journal:Scientific reports, 2018, 8(1): 9345
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29921979
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  • Cite this Data:

    Animal QTLdb: QTL164870 was published in 2018, and was curated into QTLdb on 2018-11-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:164870

     

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