QTL Map Information |
Chromosome: | 14 |
QTL Peak Location: | 0.83 (cM) |
QTL Span: | 0.72-0.94 (cM) 0.5-0.7 (Mbp) |
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Upper, "Suggestive": | n/a |
Upper, "Significant": | rs208091850 |
Peak: | rs133033480 |
Lower, "Significant": | rs137205809 |
Lower, "Suggestive": | n/a |
Marker type: | SNP |
Analysis type: | QTL |
Model tested: | Mendelian |
Test base: | Genome-wise |
Threshold significance level: | Significant |
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P_values | <0.05 | Dominance effect: | n/a |
Additive effect: | n/a |
Associated Gene: | n/a |
Cis/Trans acting type: |  |
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Extended information: |
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QTL Experiment in Brief |
Animals: | Animals were Holstein, Nordic Red, and Jersey cattle. |
Breeds associated:
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Design: | Animals were genotyped using a 50K SNP chip, with data imputed to HD and whole-genome sequence level, and analyzed for milk production, mastitis, health, and fertility traits. |
Analysis: | Single-marker GWAS was conducted using a two-step variance component-based method. |
Software: | EMMAX, IMPUTE2 v2.3.1 |
Notes: | |
Links: | Edit |
Reference |
Authors: | Fang L, Sørensen P, Sahana G, Panitz F, Su G, Zhang S, Yu Y, Li B, Ma L, Liu G, Lund MS, Thomsen B |
Affiliation: | Section for Molecular Genetics and Systems Biology, Department of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark |
Title: | MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle |
Journal: | Scientific reports, 2018, 8(1): 9345 |
Links: |
PubMed | Abstract | List all data
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