| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 7.38 (cM) |
| QTL Span: | 7.38-7.38 (cM)
7.4-7.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110900415 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein, Montbeliarde, and Normande cows. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Infinium BovineSNP50 BeadChip, BovineLD BeadChip, or EuroG10k SNP chip (all data mputed to 50k) and analyzed for milk production, stature, and fertility traits. A total of 48,576 SNPs were used for analysis. |
| Analysis: | A mixed linear regression model was used. Analyses were performed within each breed, then meta-analysis was carried out using a weighted Z-score model. |
| Software: | FImpute, METAL, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Marete AG, Guldbrandtsen B, Lund MS, Fritz S, Sahana G, Boichard D |
| Affiliation: | UMR GABI, INRA, AgroParisTech, Université Paris Saclay, 78350 Jouy en Josas, France |
| Title: | A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations |
| Journal: | Frontiers in genetics, 2018, 9: 522 |
| Links: |
PubMed | Abstract | List all data
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