| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 79.16 (cM) |
| QTL Span: | 79.16-79.16 (cM)
66.4-66.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs434615596 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SLA2 (Src like adaptor 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Irish dairy cattle with >87.5% Holstein-Friesian background. |
| Breeds associated:
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| Design: | Animals were initially genotyped using one of seven Illumina arrays, with data imputed to HD, and analyzed for humoral immune response to Mycobacterium avium subspecies paratuberculosis. |
| Analysis: | Linear mixed models were used. |
| Software: | ASReml, FImpute2, SAMtools, Beagle, WOMBAT |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | McGovern S P, Purfield D C, Ring S C, Carthy T R, Graham D A, Berry D P |
| Affiliation: | Teagasc, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork, Ireland P61C996 |
| Title: | Candidate genes associated with the heritable humoral response to Mycobacterium avium subspecies paratuberculosis in dairy cows have factors in common with gastrointestinal diseases in humans |
| Journal: | Journal of dairy science, 2019, 102(5):4249-4263 |
| Links: |
PubMed | Abstract | List all data
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