| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 124.26 (cM) |
| QTL Span: | 123.87-124.65 (cM)
129.0-129.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs110915186 |
| Peak: | |
| Lower, "Significant": | rs42526539 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Suggestive |
 |
VARIANCE | 0.33% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Danish Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for fertility traits. A total of 46,342 SNPs were used for analysis. |
| Analysis: | Single-step GWAS was performed to locate genomic regions related to the intercept and slope in the reaction norm model for interval from calving to first insemination and interval from first to last insemination. |
| Software: | DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang Z, Kargo M, Liu A, Thomasen JR, Pan Y, Su G |
| Affiliation: | Department of Molecular Biology and Genetics, Center for Quantitative Genetics and Genomics, Aarhus University, Blichers Allé 20, Postboks 50, Tjele, DK, 8830, Denmark |
| Title: | Genotype-by-environment interaction of fertility traits in Danish Holstein cattle using a single-step genomic reaction norm model |
| Journal: | Heredity, 2019, 123(2):202-214 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | intercept |
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