| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
132.1-132.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs43270914 |
| Peak: | |
| Lower, "Significant": | rs136220473 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.50% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nellore bulls. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip (data imputed to HD) or BovineHD BeadChip and analyzed for testicular hypoplasia. A total of 500,689 SNPs were used for analysis. |
| Analysis: | The Bayes C method was used for GWAS. |
| Software: | FImpute, PLINK, THRGIBBS1F90, GS3 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Neves HHR, Vargas G, Brito LF, Schenkel FS, Albuquerque LG, Carvalheiro R |
| Affiliation: | GenSys Associated Consultants, Porto Alegre, Rio Grande do Sul, Brazil; National Council for Science and Technological Development (Cnpq), BrasÃlia, Distrito Federal, Brazil |
| Title: | Genetic and genomic analyses of testicular hypoplasia in Nellore cattle |
| Journal: | PloS one, 2019, 14(1): e0211159 |
| Links: |
PubMed | Abstract | List all data
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