QTL Map Information |
Chromosome: | 14 |
QTL Peak Location: | 61.09 (cM) |
QTL Span: | 61.05-61.13 (cM) 45.5-45.5 (Mbp) |
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Upper, "Suggestive": | rs110604261 |
Upper, "Significant": | n/a |
Peak: | rs135975562 |
Lower, "Significant": | n/a |
Lower, "Suggestive": | rs110803358 |
Marker type: | SNP |
Analysis type: | QTL |
Model tested: | Mendelian |
Test base: | Experiment-wise |
Threshold significance level: | Suggestive |
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P_values | <0.10 | Dominance effect: | n/a |
Additive effect: | n/a |
Associated Gene: | n/a |
Cis/Trans acting type: |  |
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Extended information: |
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QTL Experiment in Brief |
Animals: | Animals were Mexican Holstein cattle. |
Breeds associated:
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Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for susceptibility to bovine tuberculosis. A total of 438,555 SNPs were used for GWAS. |
Analysis: | A case-control approach with selective DNA pooling was used. |
Software: | |
Notes: | |
Links: | Edit |
Reference |
Authors: | González-Ruiz S, Strillacci MG, Durán-Aguilar M, Cantó-Alarcón GJ, Herrera-Rodríguez SE, Bagnato A, Guzmán LF, Milián-Suazo F, Román-Ponce SI |
Affiliation: | Centro Nacional de Investigación Disciplinaria en Fisiología y Mejoramiento animal, INIFAP, SAGARPA, Km. 1 Carretera a Colón, Ajuchitlán, Colón, Querétaro C.P. 76280, Mexico |
Title: | Genome-Wide Association Study in Mexican Holstein Cattle Reveals Novel Quantitative Trait Loci Regions and Confirms Mapped Loci for Resistance to Bovine Tuberculosis |
Journal: | Animals : an open access journal from MDPI, 2019, 9(9) |
Links: |
PubMed | Abstract | List all data
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