Release 56
(Apr 24, 2025)

QTL 179009 Description:

 Trait Information
Trait name: Bovine tuberculosis susceptibility Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: BTBS Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:14
QTL Peak Location:61.09 (cM)
QTL Span:61.05-61.13 (cM)
45.5-45.5 (Mbp)
Upper, "Suggestive":rs110604261
Upper, "Significant":n/a
Peak:rs135975562
Lower, "Significant":n/a
Lower, "Suggestive":rs110803358
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
P_values<0.10
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #179009
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Mexican Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for susceptibility to bovine tuberculosis. A total of 438,555 SNPs were used for GWAS.
    Analysis:A case-control approach with selective DNA pooling was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:González-Ruiz S, Strillacci MG, Durán-Aguilar M, Cantó-Alarcón GJ, Herrera-Rodríguez SE, Bagnato A, Guzmán LF, Milián-Suazo F, Román-Ponce SI
    Affiliation: Centro Nacional de Investigación Disciplinaria en Fisiología y Mejoramiento animal, INIFAP, SAGARPA, Km. 1 Carretera a Colón, Ajuchitlán, Colón, Querétaro C.P. 76280, Mexico
    Title:Genome-Wide Association Study in Mexican Holstein Cattle Reveals Novel Quantitative Trait Loci Regions and Confirms Mapped Loci for Resistance to Bovine Tuberculosis
    Journal:Animals : an open access journal from MDPI, 2019, 9(9)
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #31480266
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL179009 was published in 2019, and was curated into QTLdb on 2019-09-23. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:179009

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team