| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | 63.83 (cM) |
| QTL Span: | 63.83-63.83 (cM)
57.8-57.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43088297 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to HD SNPs, and analyzed for milk beta-hydroxybutyrate concentration as an indicator of subclinical ketosis. A total of 298,210 SNPs were used for analysis. |
| Analysis: | A single-SNP regression mixed linear model was used. |
| Software: | FImpute, snp1101 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Nayeri S, Schenkel F, Fleming A, Kroezen V, Sargolzaei M, Baes C, Cánovas A, Squires J, Miglior F |
| Affiliation: | Centre for Genetic Improvement of Livestock, Department of Animal Biosciences, University of Guelph, Guelph, ON, N1G 2W1, Canada |
| Title: | Genome-wide association analysis for β-hydroxybutyrate concentration in Milk in Holstein dairy cattle |
| Journal: | BMC genetics, 2019, 20(1): 58 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Subclinical ketosis indicated by milk beta-hydroxybutyric acid concentration; second and later lactations |
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