| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 33.53 (cM) |
| QTL Span: | 33.53-33.53 (cM)
30.4-30.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs133335343 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were primiparous Holstein cows. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for fertility traits. A total of 625,093 SNPs were used for analysis. |
| Analysis: | An efficient mixed-model association eXpedited (EMMAX) model was used for GWAS. Additive, dominant, and recessive models were analyzed for each phenotype. |
| Software: | SVS v9.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kiser JN, Clancey E, Moraes JGN, Dalton J, Burns GW, Spencer TE, Neibergs HL |
| Affiliation: | Department of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA, United States |
| Title: | Identification of loci associated with conception rate in primiparous Holstein cows |
| Journal: | BMC genomics, 2019, 20(1): 840 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | at first breeding; additive and dominant models |
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