| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 21.46 (cM) |
| QTL Span: | 21.46-21.46 (cM)
23.6-23.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43293986 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.07E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian dairy cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using either the Affymetrix Axiom bovine 54K SNP array or the Illumina BovineSNP50 BeadChip and analyzed for lameness-associated traits. A total of 34,658 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used for GWAS. |
| Software: | PLINK, GEMMA, REACTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sánchez-Molano E, Bay V, Smith RF, Oikonomou G, Banos G |
| Affiliation: | The Roslin Institute Building, Scotland's Rural College, Easter Bush, Edinburgh, United Kingdom |
| Title: | Quantitative Trait Loci Mapping for Lameness Associated Phenotypes in Holstein-Friesian Dairy Cattle |
| Journal: | Frontiers in genetics, 2019, 10: 926 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | Combined records |
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