| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 46.97 (cM) |
| QTL Span: | 46.97-46.97 (cM)
32.3-32.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110090550 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.08E-07 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CARMIL1 (capping protein regulator and myosin 1 linker 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #194953
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brahman and Yunling cattle. |
| Breeds associated:
|
| Design: | GWAS was performed for serum concentration of five neurotransmitters (serotonin, dopamine, cortisol, glutamate, and ACTH). A total of 12,983,056 SNPs were used for analysis. |
| Analysis: | Mixed linear models. |
| Software: | GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Chen Q, Qu K, Ma Z, Zhan J, Zhang F, Shen J, Ning Q, Jia P, Zhang J, Chen N, Chen H, Huang B, Lei C |
| Affiliation: | Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China |
| Title: | Genome-Wide Association Study Identifies Genomic Loci Associated With Neurotransmitter Concentration in Cattle |
| Journal: | Frontiers in genetics, 2020, 11: 139 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #32292413
Add your comments
Note similar findings
Note contradictions
|
