| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | 19.12 (cM) |
| QTL Span: | 18.37-19.87 (cM)
15.9-17.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs109563545 |
| Peak: | rs41933103 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Angus, Hereford, Simmental, Charolais, and Limousin cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 54790 SNPs using the BovineSNP50 BeadArray, in addition to 96 SNPs within 186 kb of CAST and CAPN1, and analyzed for meat tenderness (shear force). After filtering, the data set contained 40645 SNPs. |
| Analysis: | A single-trait mixed linear animal model was used. |
| Software: | |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | McClure M C, Ramey H R, Rolf M M, McKay S D, Decker J E, Chapple R H, Kim J W, Taxis T M, Weaber R L, Schnabel R D, Taylor J F, |
| Affiliation: | Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA. |
| Title: | Genome-wide association analysis for quantitative trait loci influencing Warner-Bratzler shear force in five taurine cattle breeds. |
| Journal: | Animal genetics, 2012, 43 (6): 662-73 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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