| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 102.86 (cM) |
| QTL Span: | 102.86-102.86 (cM)
91.4-91.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs132964769 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SHROOM3 (shroom family member 3) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Montbeliarde, Normande, and Holstein cattle. |
| Breeds associated:
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| Design: | A two-step, within-breed GWAS was performed for milk production, udder health, and udder morphology traits. The most promising candidate variants identified in bull sequence-based GWAS were validated in younger populations of cows. |
| Analysis: | Mixed linear models were used. |
| Software: | GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Tribout T, Croiseau P, Lefebvre R, Barbat A, Boussaha M, Fritz S, Boichard D, Hoze C, Sanchez MP |
| Affiliation: | Université Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France |
| Title: | Confirmed effects of candidate variants for milk production, udder health, and udder morphology in dairy cattle |
| Journal: | Genetics, Selection, Evolution : GSE, 2020, 52(1): 55 |
| Links: |
PubMed | Abstract | List all data
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