| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 2.41 (cM) |
| QTL Span: | 2.28-2.53 (cM)
15.9-15.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109799225 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were 523 dairy cows from upstate New York. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for mastitis traits. A total of 581,663 SNPs were used for analysis. |
| Analysis: | Efficient mixed model linear analysis (EMMAX) was used for GWAS. |
| Software: | Golden Helix SVS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Miles AM, Huson HJ |
| Affiliation: | Department of Animal Science, Cornell University, Ithaca, NY 14853 |
| Title: | Time- and population-dependent genetic patterns underlie bovine milk somatic cell count |
| Journal: | Journal of dairy science, 2020, 103(9): 8292-8304 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | 210-230 DIM |
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