| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 140.91 (cM) |
| QTL Span: | 140.91-140.91 (cM)
144.0-144.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110278717 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0249 | | Dominance effect: | -0.6732 |
| Additive effect: | 0.0579 |
| Associated Gene: | AGPAT3 (1-acylglycerol-3-phosphate O-acyltransferase 3) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #218514
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped for 17 SNPs in the AGPAT3 gene and analyzed for milk fatty acid composition. |
| Analysis: | Single-locus and haplotype-based association analyses were carried out using mixed animal models. |
| Software: | Haploview, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Shi L, Wu X, Yang Y, Ma Z, Lv X, Liu L, Li Y, Zhao F, Han B, Sun D |
| Affiliation: | Department of Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Agriculture and Rural Affairs, China Agricultural University, Beijing, China |
| Title: | A post-GWAS confirming the genetic effects and functional polymorphisms of AGPAT3 gene on milk fatty acids in dairy cattle |
| Journal: | Journal of animal science and biotechnology, 2021, 12(1): 24 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #33522959
Add your comments
Note similar findings
Note contradictions
|
