| QTL Map Information |
|---|
| Chromosome: | 8 |
| QTL Peak Location: | 118.80 (cM) |
| QTL Span: | 118.80-118.80 (cM)
107.1-107.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43578060 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | TLR4 (toll-like receptor 4) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #219887
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein bulls. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in 10 possible candidate genes for mastitis-related traits and de-regressed breeding values for somatic cell score were used for association analysis. |
| Analysis: | A Wilcoxon-Mann-Whitney test and the GRAMMAR approach were used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Moretti R, Soglia D, Chessa S, Sartore S, Finocchiaro R, Rasero R, Sacchi P |
| Affiliation: | Department of Veterinary Science, University of Turin, 10095 Grugliasco (Turin), Italy |
| Title: | Identification of SNPs Associated with Somatic Cell Score in Candidate Genes in Italian Holstein Friesian Bulls |
| Journal: | Animals, 2021, 11(2) |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #33535694
Add your comments
Note similar findings
Note contradictions
|
