| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
0.5-0.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs137133854 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.25E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #221305
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein, Angus, Charolais, Hereford, Red Angus, and crossbred beef cattle. The data set consisted of 1,849 beef cattle and 2,585 Holstein calves. |
| Breeds associated:
|
| Design: | Animals were genotyped using the BovineHD BeadChip (777,962 SNPs) to identify QTL and leading edge genes associated with bovine corona virus (BCoV) and BCov plus bovine respiratory disease. Data was collected on animals from feedlots in Washington and Colorado, and dairies in California and New Mexico. |
| Analysis: | A genome-wide association analysis (GWAA) identified QTL using an EMMAX model. |
| Software: | Golden Helix SNP and Variation Suite (SVS) |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kiser JN, Neibergs HL |
| Affiliation: | Department of Animal Sciences, Washington State University, Pullman WA 99164 |
| Title: | Identifying loci associated with bovine corona virus infection and bovine respiratory disease in dairy and feedlot cattle |
| Journal: | Frontiers in Veterinary Science, 2021, 8:679074 |
| Links: |
No PubMed entry | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Combined Holstein and Beef GWAA |
User inputs on reference #ISU0120
Add your comments
Note similar findings
Note contradictions
|
