| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
26.2-26.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41582700 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.00E-04 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Sahiwal cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using a customized version of the Illumina BovineHD BeadChip and GWAS was performed for fertility and growth traits. A total of 43,483 SNPs were used for analysis. |
| Analysis: | A compressed mixed linear model was used. |
| Software: | PLINK 1.9, SNP2GO in R, GAPIT in R, WOMBAT, MCMCglmm in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kour A, Deb SM, Nayee N, Niranjan SK, Raina VS, Mukherjee A, Gupta ID, Patil CS |
| Affiliation: | ICAR-National Dairy Research Institute, Karnal, Haryana, India |
| Title: | Novel insights into genome-wide associations in Bos indicus reveal genetic linkages between fertility and growth |
| Journal: | Animal biotechnology, 2023, 34(1):39-55 |
| Links: |
PubMed | Abstract | List all data
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