| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
104.1-104.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs134253733 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.03E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian and Jersey dairy cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina 777K BovineHD BeadChip or 50K IDBv4 chip (with data imputed to HD), and GWAS were performed for intestinal atresia. |
| Analysis: | A case-control study was used for GWAS. |
| Software: | Fimpute, SAS v9.4, PLINK, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Keane OM, Carthy TR, Hanrahan JP, Matthews D, McEwan JC, Rowe SJ, Kenneally J, Mee JF |
| Affiliation: | Animal & Bioscience Department, Teagasc, Dunsany, Co. Meath, Ireland |
| Title: | Risk factors for, and genetic association with, intestinal atresia in dairy calves |
| Journal: | Animal Genetics, 2023, 54(2):104-112 |
| Links: |
PubMed | Abstract | List all data
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