Release 56
(Apr 24, 2025)

QTL 263397 Description:

 Trait Information
Trait name: Sperm motility Vertebrate Trait Ontology: Sperm motility trait
Trait details: sperm post-thaw motility Product Trait Ontology: n/a
Symbol: SPMOT Clinical Measurement Ontology: Motile sperm count to total sperm count ratio
 QTL Map Information
Chromosome:4
QTL Peak Location:n/a
QTL Span:n/a
88.9-88.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42446055
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.00006025595861
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Angus bulls.
     Breeds associated:
    Design:Using SNP genotype data provided by the American Angus Association, GWAS were performed for semen quality traits. A total of m38,515 SNPs were used for analysis.
    Analysis:A multi-trait animal model was used.
    Software:BLUPF90, POSTGSF90, CMplot in R, Qvalue in R
    Notes: 
    Links:Edit

     Reference
    Authors:Butler M L, Hartman A R, Bormann J M, Weaber R L, Grieger D M, Rolf M M
    Affiliation:Department of Animal Science Kansas State University, Manhattan, Kansas, 66502, USA
    Title:Genome-wide association study of beef bull semen attributes
    Journal:BMC Genomics, 2022, 23(1): 74
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #35065600
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  • Cite this Data:

    Animal QTLdb: QTL263397 was published in 2022, and was curated into QTLdb on 2023-02-14. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:263397

     

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