| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 80.48 (cM) |
| QTL Span: | 80.48-80.48 (cM)
50.8-50.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs134075677 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0103 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CCDC36 (coiled-coil domain containing 36) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for susceptibility to foot-and-mouth disease. A total of 624,532 SNPs were used for analysis. |
| Analysis: | Permutation testing was performed. |
| Software: | PERMORY |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lee BY, Lee KN, Lee T, Park JH, Kim SM, Lee HS, Chung DS, Shim HS, Lee HK, Kim H |
| Affiliation: | Foot-and-Mouth Disease Division, Animal and Plant Quarantine Agency, Anyang 430-757, Korea |
| Title: | Bovine Genome-wide Association Study for Genetic Elements to Resist the Infection of Foot-and-mouth Disease in the Field |
| Journal: | Asian-Australasian journal of animal sciences, 2015, 28(2): 166-70 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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