Release 56
(Apr 24, 2025)

QTL 56635 Description:

 Trait Information
Trait name: Milk palmitoleic acid content Vertebrate Trait Ontology: Milk fatty acid cis-9-C16:1 amount
Reported name: (n/a) Product Trait Ontology: Milk fatty acid cis-9-C16:1 content
Symbol: MFA-C16:1 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:19
QTL Peak Location:12.90 (cM)
QTL Span:13.37-13.37 (cM)
7.0-7.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs110401808
Peak:
Lower, "Significant":rs109026707
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCE2.9
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #56635
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  •  QTL Experiment in Brief
    Animals:Animals were Dutch Holstein Friesian cows.
     Breeds associated:
    Design:Animals were genotyped using a custom Infinium array and analyzed for milk fatty acid content in summer milk samples. A total of 44,581 SNPs were used for analysis.
    Analysis:A univariate animal model was used.
    Software:ASReml, R software
    Notes: 
    Links:Edit

     Reference
    Authors:Bouwman AC, Visker MH, van Arendonk JA, Bovenhuis H
    Affiliation:Animal Breeding and Genomics Centre, Wageningen University, PO Box 338, Wageningen 6700 AH, The Netherlands
    Title:Genomic regions associated with bovine milk fatty acids in both summer and winter milk samples
    Journal:BMC genetics, 2012, 13: 93
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Summer milk samples
    User inputs on reference #23107417
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  • Cite this Data:

    Animal QTLdb: QTL56635 was published in 2012, and was curated into QTLdb on 2015-07-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:56635

     

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