| QTL Map Information |
|---|
| Chromosome: | X |
| QTL Peak Location: | 53.37 (cM) |
| QTL Span: | 53.37-53.37 (cM)
51.1-51.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs134782295 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.32 | | P_values | <0.001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CENPI (centromere protein I) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #56954
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brahman, Tropical Composite, and crossbred cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in several candidate genes on the X chromosome and analyzed for reproductive and growth traits. |
| Analysis: | Single marker regression using a mixed model analysis of variance was used. |
| Software: | ASREML, PLINK |
| Notes: | Data entered only for SNPs with rs ID numbers |
| Links: | Edit |
| Reference |
|---|
| Authors: | de Camargo GMF, Porto-Neto LR, Kelly MJ, Bunch RJ, McWilliam SM, Tonhati H, Lehnert SA, Fortes MRS, Moore SS |
| Affiliation: | Queensland Alliance for Agriculture and Food Innovation, Centre for Animal Science, The University of Queensland, Brisbane, QLD, 4067, Australia |
| Title: | Non-synonymous mutations mapped to chromosome X associated with andrological and growth traits in beef cattle |
| Journal: | BMC genomics, 2015, 16: 384 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | 18 months |
User inputs on reference #25975716
Add your comments
Note similar findings
Note contradictions
|
