| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 123.21 (cM) |
| QTL Span: | 122.73-123.68 (cM)
127.6-127.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs43689457 |
| Peak: | rs133429171 |
| Lower, "Significant": | rs43267780 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nordic Red Cattle (Danish Red, Finnish Ayrshire, and Swedish Red). |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to HD, then full sequence, leaving a total of 8,938,927 markers. Markers were analyzed for association with female fertility traits. |
| Analysis: | Single-locus regression analysis was performed using a linear mixed model. |
| Software: | DMU, IMPUTE2, Beagle |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Höglund JK, Buitenhuis B, Guldbrandtsen B, Lund MS, Sahana G |
| Affiliation: | Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics Aarhus University, P.O. Box 50, DK 8830, Tjele, Denmark |
| Title: | Genome-wide association study for female fertility in Nordic Red cattle |
| Journal: | BMC genetics, 2015, 16: 110 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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