| QTL Map Information |
|---|
| Chromosome: | 26 |
| QTL Peak Location: | 30.75 (cM) |
| QTL Span: | 30.75-30.75 (cM)
21.3-21.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41255702 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #62875
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese and Danish Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the BovineSNP50 BeadChip or BovineHD BeadChip and analyzed for milk fatty acid composition. BovineSNP50 data were imputed to HD marker data. The final marker set included 486,464 SNPs. |
| Analysis: | Single-SNP linear regression models were used. |
| Software: | DMU |
| Notes: | This study used data that were previously analyzed (PMID 24858810 & 25511820). Only the Chinese data (here imputed from 50k to HD) and combined data (Chinese & Danish populations) that reached genome-wide significance were entered. |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li X, Buitenhuis A J, Lund M S, Li C, Sun D, Zhang Q, Poulsen N A, Su G |
| Affiliation: | Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, 8830 Tjele, Denmark |
| Title: | Joint genome-wide association study for milk fatty acid traits in Chinese and Danish Holstein populations |
| Journal: | Journal of dairy science, 2015, 98(11): 8152-63 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Joint analysis of Chinese and Danish data |
User inputs on reference #26364108
Add your comments
Note similar findings
Note contradictions
|
