| QTL Map Information |
|---|
| Chromosome: | 28 |
| QTL Peak Location: | 32.38 (cM) |
| QTL Span: | 32.38-32.38 (cM)
22.8-22.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42101341 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 3.99 | | P_values | 5.73E-04 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CTNNA3 (catenin alpha 3) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brahman heifers. |
| Breeds associated:
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| Design: | Animals were genotyped for 20,000 SNPs using a Neogen chip, with data imputed to 51,588 SNPs. Genotypes were analyzed for association with outcome of fixed-time artificial insemination. |
| Analysis: | A univariate linear mixed model was used. |
| Software: | SAS, Qxpak |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Porto-Neto L R, Edwards S, Fortes M R S, Lehnert S A, Reverter A, McGowan M |
| Affiliation: | Commonwealth Scientific and Industrial Research Organization, Agriculture, St Lucia QLD 4067, Australia; School of Chemistry and Molecular Bioscience, The University of Queensland, St Lucia, Brisbane, QLD, 4072 Australia |
| Title: | Genome-wide association for the outcome of fixed-time artificial insemination of Brahman heifers in northern Australia |
| Journal: | Journal of animal science, 2015, 93(11): 5119-27 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | Pregnancy outcome after fixed-time AI |
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