Release 56
(Apr 24, 2025)

QTL 296393 Description:

 Trait Information
Trait name: Body circumference Vertebrate Trait Ontology: n/a
Trait details: chest girth Product Trait Ontology: n/a
Symbol: BODYCIR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:n/a
QTL Span:n/a
115.7-115.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs655821159
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Comparison-wise
Threshold significance level:Significant
P_values<1E-6
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Tashi goats, a Chinese indigenous breed.
     Breeds associated:
    n/a
    Design:Animals were subjected to whole-genome sequencing, and association analyses were performed for body conformation traits. A total of 11,257,923 SNPs were used for analysis.
    Analysis:Linear mixed models were used.
    Software:GATK v4.1.8.1, CMplot v4.5.0, PLINK v0.76, GEMMA v0.98.5, qqman
    Notes: 
    Links:Edit

     Reference
    Authors:Yang R, Zhou D, Tan X, Zhao Z, Lv Y, Tian X, Ren L, Wang Y, Li J, Zhao Y, Zhang J
    Affiliation:Guizhou Provincial Breeding Livestock and Poultry Germplasm Determination Center, Guiyang 550018, China
    Title:Genome-Wide Association Study of Body Conformation Traits in Tashi Goats (Capra hircus)
    Journal:Animals : an open access journal from MDPI, 2024, 14(8):1145
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #38672293
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  • Cite this Data:

    Animal QTLdb: QTL296393 was published in 2024, and was curated into QTLdb on 2024-05-17. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:296393

     

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