| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
26.8-26.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs268256406 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were New Zealand dairy goats of a variety of breeds: Alpine, Nubian, Saanen, Toggenburg, and crossbred. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Caprine 50K BeadChip, and GWAS were performed for milk production traits. A total of 41,989 SNPs were used for analysis. |
| Analysis: | Single-SNP GWAS was performed using linear regression. A BayesC GWAS was also implemented, fitting all SNPs simultaneously. |
| Software: | SAS v9.4, SNP & Variation Suite ( SVS) v8, GenSel |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Scholtens M, Jiang A, Smith A, Littlejohn M, Lehnert K, Snell R, Lopez-Villalobos N, Garrick D, Blair H |
| Affiliation: | AL Rae Centre for Genetics and Breeding, School of Agriculture, Massey University, Palmerston North, New Zealand |
| Title: | Genome-wide association studies of lactation yields of milk, fat, protein and somatic cell score in New Zealand dairy goats |
| Journal: | Journal of animal science and biotechnology, 2020, 11: 55 |
| Links: |
PubMed | Abstract | List all data
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