Horse QTL Database

Release 56
(Apr 24, 2025)

Curators: Cari Park /
Curated: 2025-04-22
Updated:

Publication # 35866615 Details

Authors:	Momen M, Brounts SH, Binversie EE, Sample SJ, Rosa GJM, Davis BW, Muir P (Contact: peter.muir@wisc.edu)
Affiliation:	Department of Surgical Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, WI 53706, USA
Title:	Selection signature analyses and genome-wide association reveal genomic hotspot regions that reflect differences between breeds of horse with contrasting risk of degenerative suspensory ligament desmitis
Journal:	G3 (Genes \| Genomics \| Genetics), 12(10):jkac179 (2022)	DOI: 10.1093/g3journal/jkac179
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Degenerative suspensory ligament desmitis reported for chromosome(s): Chr.1: Asso:315824, Asso:315825, Asso:315831, Asso:315832, Asso:315833, Asso:315834, Asso:315835, Asso:315836, Asso:315837, Asso:315881. Chr.2: Asso:315811, Asso:315817, Asso:315826, Asso:315838, Asso:315839, Asso:315840, Asso:315841, Asso:315842, Asso:315843, Asso:315844. Chr.3: Asso:315812. Chr.4: Asso:315827, Asso:315845, Asso:315846. Chr.5: Asso:315818, Asso:315847, Asso:315848. Chr.6: Asso:315813, Asso:315819, Asso:315849, Asso:315850. Chr.7: Asso:315814, Asso:315820, Asso:315828. Chr.8: Asso:315851, Asso:315852, Asso:315853, Asso:315854, Asso:315855. Chr.9: Asso:315856. Chr.10: Asso:315815, Asso:315857, Asso:315858. Chr.13: Asso:315859. Chr.15: Asso:315821, Asso:315860, Asso:315861. Chr.16: Asso:315862, Asso:315863. Chr.17: Asso:315864, Asso:315865, Asso:315866. Chr.18: Asso:315822, Asso:315829, Asso:315867. Chr.19: Asso:315868. Chr.20: Asso:315869. Chr.22: Asso:315870. Chr.23: Asso:315816, Asso:315823, Asso:315830. Chr.24: Asso:315871, Asso:315872. Chr.27: Asso:315873, Asso:315874, Asso:315875. Chr.29: Asso:315876. Chr.30: Asso:315877. Chr.31: Asso:315878, Asso:315879, Asso:315880. QTL/association Reported by chromosomes: Chr.1 (10), Chr.2 (10), Chr.3 (1), Chr.4 (3), Chr.5 (3), Chr.6 (4), Chr.7 (3), Chr.8 (5), Chr.9 (1), Chr.10 (3), Chr.13 (1), Chr.15 (3), Chr.16 (2), Chr.17 (3), Chr.18 (3), Chr.19 (1), Chr.20 (1), Chr.22 (1), Chr.23 (3), Chr.24 (2), Chr.27 (3), Chr.29 (1), Chr.30 (1), Chr.31 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Momen M, Brounts SH, Binversie EE, Sample SJ, Rosa GJM, Davis BW, Muir P (2022). Selection signature analyses and genome-wide association reveal genomic hotspot regions that reflect differences between breeds of horse with contrasting risk of degenerative suspensory ligament desmitis. G3 (Genes | Genomics | Genetics), 12(10):jkac179; Curated into QTLdb on 2025-04-22. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=BeDl3B0UiS

Momen M, Brounts SH, Binversie EE, Sample SJ, Rosa GJM, Davis BW, Muir P (2022). Selection signature analyses and genome-wide association reveal genomic hotspot regions that reflect differences between breeds of horse with contrasting risk of degenerative suspensory ligament desmitis. G3 (Genes | Genomics | Genetics), 12(10):jkac179; DOI: https://dx.doi.org/10.1093/g3journal/jkac179

Publication # 35866615 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: