| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
44.9-44.9 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs15338705 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PARK2 (parkin RBR E3 ubiquitin protein ligase) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | The F2 resource population used was from a cross between Beijing-You chickens and Cobb broilers. |
| Breeds associated:
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| Design: | Birds were genotyped using the Illumina 60k chicken SNP BeadChip and analyzed for immune traits. A total of 42,585 SNPs were used for analysis. |
| Analysis: | General linear model and compressed mixed linear model procedures were used. |
| Software: | SAS, Minitab, PLINK, TASSEL, R software |
| Notes: | |
| Links: | Edit |
| Reference |
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| Authors: | Sun Y, Li Q, Hu Y, Sun Y, Liu R, Zheng M, Wen J, Li P, Liu L, Zhao G |
| Affiliation: | Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China |
| Title: | Genomewide association study of immune traits in chicken F2 resource population |
| Journal: | Journal of animal breeding and genetics, 2016, 133(3): 197-206 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | General linear model |
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