| QTL Map Information |
|---|
| Chromosome: | Z |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
51.4-51.4 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs315597590 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were female Rhode Island Red chickens. |
| Breeds associated:
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| Design: | Birds were genotyped using the Affymetrix 600K Axiom Chicken Genotyping Array and analyzed for earlobe color. A total of 370,106 SNPs were used for analysis. |
| Analysis: | A basic case/control association analysis was used to test the association of each SNP with earlobe color. |
| Software: | PLINK, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Nie C, Zhang Z, Zheng J, Sun H, Ning Z, Xu G, Yang N, Qu L |
| Affiliation: | Department of Animal Genetics and Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China |
| Title: | Genome-wide association study revealed genomic regions related to white/red earlobe color trait in the Rhode Island Red chickens |
| Journal: | BMC genetics, 2016, 17(1): 115 |
| Links: |
PubMed | Abstract | List all data
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