| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
53.7-53.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs13653575 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CRY1 (cryptochrome circadian clock 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #119901
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Birds were male broilers from a Chinese native dwarf yellow meat-type chicken line (N301). |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the Affymetrix Axiom 600K genotyping array and analyzed for occurrence of aggressive behavior. A total of 468,020 SNPs were used for analysis. |
| Analysis: | Generalized linear mixed models were used. |
| Software: | GenABEL in R, SAS, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li Z, Zheng M, Abdalla BA, Zhang Z, Xu Z, Ye Q, Xu H, Luo W, Nie Q, Zhang X |
| Affiliation: | Guangdong Provincial Key Lab of Agro-Animal Genomics and Molecular Breeding and Key Lab of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou 510642, Guangdong, China |
| Title: | Genome-wide association study of aggressive behaviour in chicken |
| Journal: | Scientific reports, 2016, 6: 30981 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Number of fights occurring on days with at least four fights per day |
User inputs on reference #27485826
Add your comments
Note similar findings
Note contradictions
|
