| QTL Map Information |
|---|
| Chromosome: | Z |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
19.2-19.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs315243089 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | F2 chickens were produced from a cross between two parental lines, L2 (Taiwan country chickens selected for body weight, comb area, and egg production) and R- (Rhode Island Red selected for low residual feed intake). |
| Breeds associated:
n/a
|
| Design: | Birds were gentoyped using the Illumina 60K Chicken SNP iSelect chip and analyzed for growth, comb size, an antibody response to SRBC. A total of 40,618 SNPs were used for analysis. |
| Analysis: | GWAS was carried out using a univariate linear mixed model. An interval mapping method was also used for QTL detection. |
| Software: | GEMMA, R software, QTLMap, PLINK, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lien CY, Tixier-Boichard M, Wu SW, Wang WF, Ng CS, Chen CF |
| Affiliation: | Center for the Integrative and Evolutionary Galliformes Genomics, National Chung Hsing University, No. 250, Guoguang Rd., South District, Taichung, 40227, Taiwan |
| Title: | Detection of QTL for traits related to adaptation to sub-optimal climatic conditions in chickens |
| Journal: | Genetics, Selection, Evolution : GSE, 2017, 49(1): 39 |
| Links: |
PubMed | Abstract | List all data
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