| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
4.4-4.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs14669263 |
| Peak: | rs16663445 |
| Lower, "Significant": | rs16663445 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Chickens included sires from a commercial pure line created and selected by NOVOGEN and their F1 crossbred female offspring. |
| Breeds associated:
n/a
|
| Design: | Bids were genotyped using the 600K Affymetrix Axiom HD chicken genotyping array and analyzed for egg production and egg quality traits. |
| Analysis: | Data were analyzed using a mixed model that takes pedigree kinship into account. GWAS analyses were repeated separately for each trait and condition to test QTL x age and QTL x diet interactions. |
| Software: | SAS, BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Romé H, Varenne A, Hérault F, Chapuis H, Alleno C, Dehais P, Vignal A, Burlot T, Le Roy P |
| Affiliation: | Agrocampus Ouest, UMR1348 PEGASE, 65 Rue de Saint Brieuc, 35042, Rennes, France |
| Title: | GWAS analyses reveal QTL in egg layers that differ in response to diet differences |
| Journal: | Genetics, Selection, Evolution : GSE, 2016, 47: 83 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | week 18 to week 30; QTL x diet interaction |
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