| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs1059853083 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
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P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were Wenchang chickens. |
| Breeds associated:
n/a
|
| Design: | Chickens were genotyped using a custom 55K chicken SNP array. Data were imputed to whole-genome sequence level, and GWAS were performed for growth and feed efficiency traits. A total of 12,184,765 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | PLINK, Beagle 5.2, GCTA, Haploview v4.2, ASReml v4.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Cai K, Liu R, Wei L, Wang X, Cui H, Luo N, Wen J, Chang Y, Zhao G |
| Affiliation: | Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, P.R. China |
| Title: | Genome-wide association analysis identify candidate genes for feed efficiency and growth traits in Wenchang chickens |
| Journal: | BMC Genomics, 2024, 25(1): 645 |
| Links: |
PubMed | Abstract | List all data
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