| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
68.6-68.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs312688410 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 6.357E-06 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #311996
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a resource population of Gushi-Anka chickens. |
| Breeds associated:
n/a
|
| Design: | Chickens were subjected to genotyping by sequencing and GWAS were performed for muscle fiber and fat traits. A total of 321,314 SNPs were used for analysis. |
| Analysis: | Mixed linear models were used. |
| Software: | TASSEL v5.2.31, Bowtie2 v2.3.0, VCFtools v0.1.13, Beagle 4.0, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li H, Li S, Zhang H, Gu J, Dai Y, Wu R, Wang Y, Han R, Sun G, Zhang Y, Li H, Zhao Y, Li G, |
| Affiliation: | The Shennong Laboratory, Henan Agricultural University, Zhengzhou, Henan, China |
| Title: | Integrated GWAS and transcriptome analysis reveals key genes associated with muscle fibre and fat traits in Gushi chicken |
| Journal: | British poultry science, 2025, 66(1):31-41 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #39364777
Add your comments
Note similar findings
Note contradictions
|
