Authors: Zhu S, Guo T, Zhao H, Qiao G, Han M, Liu J, Yuan C, Wang T, Li F, Yue Y, Yang B
(Contact: yueyaojing@126.com; yahgbh2004@163.com ) Affiliation: Animal Science Department, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Lanzhou, China Title: Genome-Wide Association Study Using Individual Single-Nucleotide Polymorphisms and Haplotypes for Erythrocyte Traits in Alpine Merino Sheep Journal: Frontiers In Genetics, 11: 848 (2020)
DOI :
10.3389/fgene.2020.00848 Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Red blood cell distribution width
Chr.1 : Asso:257592 , Asso:257640 , QTL:257648 , QTL:257678 . Chr.2 : Asso:257641 , QTL:257654 . Chr.3 : Asso:257599 , QTL:257701 . Chr.4 : Asso:257643 , QTL:257660 . Chr.5 : Asso:257583 , Asso:257594 , Asso:257602 , Asso:257603 , Asso:257604 , Asso:257606 , QTL:257661 , QTL:257673 . Chr.8 : Asso:257642 , QTL:257652 . Chr.9 : Asso:257637 , Asso:257639 . Chr.11 : Asso:257644 . Chr.14 : Asso:257638 . Chr.15 : Asso:257585 . Chr.16 : QTL:257699 . Chr.17 : Asso:257578 , Asso:257593 . Chr.18 : QTL:257684 , QTL:257686 . Chr.19 : QTL:257679 . Chr.20 : QTL:257656 , QTL:257682 . Chr.21 : Asso:257587 , QTL:257649 , QTL:257668 , QTL:257697 .
QTL for Mean corpuscular hemoglobin content
Chr.1 : Asso:257589 , Asso:257625 , QTL:257645 , QTL:257669 . Chr.2 : Asso:257631 , Asso:257632 , QTL:257651 , QTL:257681 , QTL:257688 , QTL:257698 , QTL:257703 . Chr.3 : Asso:257598 , Asso:257605 , QTL:257687 . Chr.4 : Asso:257630 , Asso:257633 , QTL:257657 , QTL:257689 . Chr.5 : QTL:257675 , QTL:257692 . Chr.7 : Asso:257626 , Asso:257627 , QTL:257670 , QTL:257671 . Chr.8 : Asso:257628 , QTL:257650 , QTL:257683 . Chr.9 : Asso:257621 , Asso:257622 . Chr.10 : Asso:257624 . Chr.11 : Asso:257623 . Chr.12 : Asso:257582 . Chr.13 : Asso:257600 , QTL:257694 . Chr.15 : Asso:257579 . Chr.16 : QTL:257663 . Chr.17 : Asso:257580 , Asso:257586 , Asso:257629 . Chr.20 : QTL:257659 . Chr.21 : Asso:257588 , Asso:257608 , QTL:257646 , QTL:257667 , QTL:257691 , QTL:257693 . Chr.22 : Asso:257607 .
QTL for Red blood cell count
Chr.1 : Asso:257601 , Asso:257617 , QTL:257647 , QTL:257680 . Chr.2 : Asso:257613 , Asso:257618 , QTL:257658 , QTL:257700 . Chr.4 : Asso:257614 , QTL:257665 . Chr.8 : Asso:257611 , Asso:257612 , QTL:257655 , QTL:257666 . Chr.9 : Asso:257609 , Asso:257610 . Chr.11 : Asso:257615 . Chr.13 : Asso:257581 . Chr.15 : Asso:257595 . Chr.17 : Asso:257616 . Chr.20 : QTL:257664 . Chr.21 : Asso:257584 , QTL:257653 , QTL:257662 .
QTL for Hemoglobin
Chr.17 : Asso:257590 . Chr.18 : Asso:257619 .
QTL for Mean corpuscular hemoglobin concentration
Chr.1 : Asso:257634 , QTL:257677 , QTL:257696 , QTL:257702 . Chr.8 : Asso:257635 , QTL:257674 . Chr.12 : Asso:257591 . Chr.13 : Asso:257597 . Chr.21 : QTL:257672 . Chr.24 : Asso:257596 . Chr.26 : Asso:257636 , QTL:257690 .
QTL for Hematocrit
Chr.1 : QTL:257676 . Chr.2 : Asso:257620 . Chr.9 : QTL:257695 . Chr.13 : QTL:257685 .
QTL/association Reported by chromosomes:
Chr.1 (17) ,
Chr.2 (14) ,
Chr.3 (5) ,
Chr.4 (8) ,
Chr.5 (10) ,
Chr.7 (4) ,
Chr.8 (11) ,
Chr.9 (7) ,
Chr.10 (1) ,
Chr.11 (3) ,
Chr.12 (2) ,
Chr.13 (5) ,
Chr.14 (1) ,
Chr.15 (3) ,
Chr.16 (2) ,
Chr.17 (7) ,
Chr.18 (3) ,
Chr.19 (1) ,
Chr.20 (4) ,
Chr.21 (14) ,
Chr.22 (1) ,
Chr.24 (1) ,
Chr.26 (2) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from Zhu S, Guo T, Zhao H, Qiao G, Han M, Liu J, Yuan C, Wang T, Li F, Yue Y, Yang B (2020). Genome-Wide Association Study Using Individual Single-Nucleotide Polymorphisms and Haplotypes for Erythrocyte Traits in Alpine Merino Sheep. Frontiers in Genetics, 11: 848;
Curated into QTLdb on 2022-04-26. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=IhAk2L0VfX
OR
Zhu S, Guo T, Zhao H, Qiao G, Han M, Liu J, Yuan C, Wang T, Li F, Yue Y, Yang B (2020). Genome-Wide Association Study Using Individual Single-Nucleotide Polymorphisms and Haplotypes for Erythrocyte Traits in Alpine Merino Sheep. Frontiers in Genetics, 11: 848; DOI: https://dx.doi.org/10.3389/fgene.2020.00848
